Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AL592437.2-201ENST00000421655 2434 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 Y_RNA.133-201ENST00000363428 110 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 RNU6-474P-201ENST00000384243 107 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 SNORA48.7-201ENST00000391302 135 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 MIR548P-201ENST00000408336 84 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 RNU6-77P-201ENST00000410554 91 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 AL353193.1-201ENST00000421444 268 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 GTF2IP20-201ENST00000431663 360 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 AC002486.1-201ENST00000435098 391 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 RPL37P21-201ENST00000435890 276 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 RPL23AP89-201ENST00000439324 255 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 MRPL50P4-201ENST00000446432 475 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 IFNWP4-201ENST00000453148 294 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 RPL37P3-201ENST00000456825 293 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 AC110792.1-201ENST00000491826 472 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 AC146944.2-203ENST00000502493 354 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 AC139495.1-202ENST00000513164 354 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 SNORD116-26-201ENST00000516006 96 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 RNU1-45P-201ENST00000517191 141 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 IGJP1-201ENST00000522682 475 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 MIR4512-201ENST00000583257 77 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 NF1P5-201ENST00000588287 448 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 AC006116.10-201ENST00000591836 581 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 AC099669.2-201ENST00000616549 437 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 7SK.10-201ENST00000621414 298 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 AC091905.1-201ENST00000624400 311 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 U6.107-201ENST00000637108 79 ntBASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SH3RF3Q8TEJ3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AC016588.2-201ENST00000632484 3021 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 Y_RNA.145-201ENST00000363527 102 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AL603766.1-201ENST00000407763 664 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 RNA5SP118-201ENST00000410385 109 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 RN7SKP202-201ENST00000410439 330 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 OR1AA1P-201ENST00000419597 916 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 DNAJC19P8-201ENST00000452887 259 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AL121877.1-201ENST00000453704 622 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 MTCO3P20-201ENST00000454926 688 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 RPL36AP13-201ENST00000457490 317 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AC021146.3-201ENST00000511911 260 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 SNORA19.2-201ENST00000516013 114 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 RNU7-143P-201ENST00000516781 65 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 RN7SKP116-201ENST00000516902 319 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 RNU6-264P-201ENST00000517134 104 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 IGKV2-36-201ENST00000519999 223 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AP003034.1-201ENST00000534621 422 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AC093249.1-201ENST00000567049 203 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AC025627.2-201ENST00000576220 160 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AL162413.1-201ENST00000603198 110 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AC113139.1-201ENST00000605049 239 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AC010680.4-201ENST00000605334 543 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AL132822.1-201ENST00000617063 513 ntBASIC4.85□□□□□ -1.63
SH3RF3Q8TEJ3 AC092650.2-201ENST00000619984 902 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms