Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 RPS29P4-201ENST00000414733 161 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 RPL35AP22-201ENST00000436855 335 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 RPS29P7-201ENST00000439662 171 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 EEF1B2P7-201ENST00000451177 676 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AC092155.2-201ENST00000454675 477 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 RN7SL610P-201ENST00000463845 291 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 RN7SL274P-201ENST00000492268 272 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 KATNBL1P4-201ENST00000503545 918 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AC112673.1-201ENST00000513168 575 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 SNORA48.10-201ENST00000516965 160 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 SCARNA11.3-201ENST00000517276 130 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 HMGB1P23-201ENST00000518743 568 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 CKS1BP1-201ENST00000555221 240 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AL049874.4-201ENST00000557593 255 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 MIR3122-201ENST00000577243 73 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AC025588.3-201ENST00000604182 274 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AC110792.4-201ENST00000609843 298 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AP000254.1-201ENST00000609934 520 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AC084757.4-201ENST00000616350 526 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AC073968.1-201ENST00000618594 637 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AC109809.1-201ENST00000619665 545 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 CR392039.5-201ENST00000623201 510 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 AL365361.1-201ENST00000566942 3481 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 MTCO1P6-201ENST00000481192 1384 ntBASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.3□□□□□ -2.2
SPTSSBQ8NFR3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 MIR372-201ENST00000362225 67 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 RNU4-23P-201ENST00000362839 140 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 U8.11-201ENST00000384699 133 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 U8.12-201ENST00000384701 133 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 RNU6-1328P-201ENST00000410938 106 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 RAB9AP3-201ENST00000412737 573 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 TATDN1P1-201ENST00000414123 891 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AC063979.1-201ENST00000415539 377 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AC091390.3-201ENST00000426478 338 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AC236972.1-201ENST00000433225 199 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AC011816.1-201ENST00000441346 546 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AC097499.1-201ENST00000444277 208 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 RAB9AP1-201ENST00000449393 573 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 U8.18-201ENST00000459285 133 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 DYNLL1P5-201ENST00000467158 270 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AC117394.1-201ENST00000477323 567 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AC022447.3-201ENST00000506865 495 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AC025857.1-201ENST00000525252 377 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 GTF2IP22-201ENST00000554443 182 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AC012493.3-201ENST00000604494 112 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 AC012443.1-201ENST00000605605 231 ntBASIC1.29□□□□□ -2.2
SPTSSBQ8NFR3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms