Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MIR6733-201ENST00000635723 61 ntBASIC2.91□□□□□ -1.94
NUDCD3Q8IVD9 MKKS-204ENST00000639674 192 ntBASIC2.91□□□□□ -1.94
NUDCD3Q8IVD9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
NUDCD3Q8IVD9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
NUDCD3Q8IVD9 AC092435.3-201ENST00000565538 3654 ntBASIC2.91□□□□□ -1.94
NUDCD3Q8IVD9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NUDCD3Q8IVD9 AL049781.1-201ENST00000623195 3585 ntBASIC2.91□□□□□ -1.94
NUDCD3Q8IVD9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NUDCD3Q8IVD9 SGO1P2-201ENST00000429458 1589 ntBASIC2.91□□□□□ -1.94
NUDCD3Q8IVD9 ASNSP3-201ENST00000451989 1306 ntBASIC2.91□□□□□ -1.94
NUDCD3Q8IVD9 GABRG2-229ENST00000641017 3628 ntBASIC2.91□□□□□ -1.94
NUDCD3Q8IVD9 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.9□□□□□ -1.94
NUDCD3Q8IVD9 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 MIR449B-201ENST00000384995 97 ntBASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 CYCSP45-201ENST00000402289 315 ntBASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 RNU4-47P-201ENST00000410876 114 ntBASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 PSMA6P3-201ENST00000428242 164 ntBASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 AC109583.1-201ENST00000432156 268 ntBASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 AL050321.1-201ENST00000432363 400 ntBASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 RPL23AP58-201ENST00000440453 469 ntBASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 RN7SL293P-201ENST00000481765 281 ntBASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 RNU6-1095P-201ENST00000516148 108 ntBASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 SNORA31.8-201ENST00000516327 108 ntBASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 DUXAP2-201ENST00000519198 589 ntBASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 AP000857.1-201ENST00000532151 543 ntBASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 SETP2-201ENST00000553886 926 ntBASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 MIR1254-2-201ENST00000579553 63 ntBASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 AC008739.3-201ENST00000603262 127 ntBASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 AC009220.3-201ENST00000604318 586 ntBASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 AL627309.6-201ENST00000606857 840 ntBASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 AL138955.1-201ENST00000622881 1040 ntBASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 U6.101-201ENST00000637707 76 ntBASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 LRRC77P-213ENST00000637727 880 ntBASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.9□□□□□ -1.95
NUDCD3Q8IVD9 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 RNU6-1257P-201ENST00000384625 110 ntBASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 MIR670-201ENST00000390142 98 ntBASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 SNRPEP2-201ENST00000397592 279 ntBASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 MTND4P3-201ENST00000417829 541 ntBASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 VN1R34P-201ENST00000447387 883 ntBASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 GSTA11P-201ENST00000452866 669 ntBASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 USP9YP34-201ENST00000453983 808 ntBASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 RPL23AP31-201ENST00000456160 467 ntBASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 RN7SKP272-201ENST00000516988 232 ntBASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 GTF2IP8-201ENST00000560687 584 ntBASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 AC091057.2-201ENST00000602594 792 ntBASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 RPL23AP92-201ENST00000603609 255 ntBASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 AL035411.2-201ENST00000604022 421 ntBASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 RNU6-1192P-201ENST00000612197 107 ntBASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 RNU6-489P-201ENST00000618289 107 ntBASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 AP003485.1-201ENST00000625093 753 ntBASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 AP005901.5-201ENST00000545779 1796 ntBASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
NUDCD3Q8IVD9 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NUDCD3Q8IVD9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
NUDCD3Q8IVD9 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
NUDCD3Q8IVD9 Y_RNA.25-201ENST00000362528 102 ntBASIC2.88□□□□□ -1.95
NUDCD3Q8IVD9 RNU6-878P-201ENST00000384578 110 ntBASIC2.88□□□□□ -1.95
NUDCD3Q8IVD9 MIR7-3-201ENST00000384898 110 ntBASIC2.88□□□□□ -1.95
NUDCD3Q8IVD9 MIR512-1-201ENST00000384913 84 ntBASIC2.88□□□□□ -1.95
NUDCD3Q8IVD9 RNU6-298P-201ENST00000390888 96 ntBASIC2.88□□□□□ -1.95
NUDCD3Q8IVD9 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.88□□□□□ -1.95
NUDCD3Q8IVD9 MIR1289-1-201ENST00000408836 144 ntBASIC2.88□□□□□ -1.95
NUDCD3Q8IVD9 RPL7P8-201ENST00000411964 730 ntBASIC2.88□□□□□ -1.95
NUDCD3Q8IVD9 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.88□□□□□ -1.95
NUDCD3Q8IVD9 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.88□□□□□ -1.95
NUDCD3Q8IVD9 RPL7P30-201ENST00000420888 709 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms