Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL139099.1-201ENST00000497398 403 ntBASIC3.6□□□□□ -1.83
SHFQ7M4L6 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.6□□□□□ -1.83
SHFQ7M4L6 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.6□□□□□ -1.83
SHFQ7M4L6 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.6□□□□□ -1.83
SHFQ7M4L6 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.6□□□□□ -1.83
SHFQ7M4L6 AC091133.4-201ENST00000511142 308 ntBASIC3.6□□□□□ -1.83
SHFQ7M4L6 RNU6-528P-201ENST00000516926 100 ntBASIC3.6□□□□□ -1.83
SHFQ7M4L6 MTCO2P4-201ENST00000517968 247 ntBASIC3.6□□□□□ -1.83
SHFQ7M4L6 AP000907.2-201ENST00000530827 353 ntBASIC3.6□□□□□ -1.83
SHFQ7M4L6 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SHFQ7M4L6 TOMM20P2-201ENST00000540082 421 ntBASIC3.6□□□□□ -1.83
SHFQ7M4L6 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.6□□□□□ -1.83
SHFQ7M4L6 SETP2-201ENST00000553886 926 ntBASIC3.6□□□□□ -1.83
SHFQ7M4L6 AC068831.4-201ENST00000556118 109 ntBASIC3.6□□□□□ -1.83
SHFQ7M4L6 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.6□□□□□ -1.83
SHFQ7M4L6 AC022968.1-201ENST00000567372 442 ntBASIC3.6□□□□□ -1.83
SHFQ7M4L6 MIR3118-1-201ENST00000581787 76 ntBASIC3.6□□□□□ -1.83
SHFQ7M4L6 MIR5684-201ENST00000585074 65 ntBASIC3.6□□□□□ -1.83
SHFQ7M4L6 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.6□□□□□ -1.83
SHFQ7M4L6 AC012669.1-201ENST00000603209 283 ntBASIC3.6□□□□□ -1.83
SHFQ7M4L6 AL161729.3-201ENST00000603533 673 ntBASIC3.6□□□□□ -1.83
SHFQ7M4L6 AC010680.3-201ENST00000604215 520 ntBASIC3.6□□□□□ -1.83
SHFQ7M4L6 AC107304.1-201ENST00000604229 296 ntBASIC3.6□□□□□ -1.83
SHFQ7M4L6 IGHV3-29-201ENST00000604817 344 ntBASIC3.6□□□□□ -1.83
SHFQ7M4L6 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.6□□□□□ -1.83
SHFQ7M4L6 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHFQ7M4L6 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHFQ7M4L6 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHFQ7M4L6 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SHFQ7M4L6 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHFQ7M4L6 AC007685.1-201ENST00000329806 452 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 RNU1-132P-201ENST00000364300 164 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHFQ7M4L6 MIR124-3-201ENST00000384866 87 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 AL049693.1-201ENST00000402760 611 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 BX295541.1-201ENST00000417774 250 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 USP9YP36-201ENST00000424581 829 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 KCTD9P3-201ENST00000434597 1169 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 MTND4LP10-201ENST00000435146 291 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 RN7SL303P-201ENST00000469773 251 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 TMED11P-201ENST00000479478 690 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 AC107934.1-201ENST00000522215 217 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 OR4R3P-201ENST00000525084 838 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 CR383656.7-201ENST00000548164 174 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 MIR3682-201ENST00000581338 84 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 AP003465.2-201ENST00000602571 373 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 AC011468.4-201ENST00000603942 409 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 AL356218.2-201ENST00000605264 187 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 BX664608.1-201ENST00000610519 487 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 AL356585.4-201ENST00000623078 1229 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 AL732618.1-201ENST00000623251 301 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.59□□□□□ -1.83
SHFQ7M4L6 AC091953.2-201ENST00000623979 160 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 OR5AK4P-201ENST00000635912 903 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 AC068137.3-201ENST00000639191 341 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 AC073869.6-201ENST00000640656 341 ntBASIC3.59□□□□□ -1.83
SHFQ7M4L6 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHFQ7M4L6 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHFQ7M4L6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SHFQ7M4L6 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SHFQ7M4L6 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
SHFQ7M4L6 UBE3AP2-201ENST00000429033 2259 ntBASIC3.59□□□□□ -1.84
SHFQ7M4L6 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SHFQ7M4L6 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SHFQ7M4L6 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SHFQ7M4L6 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SHFQ7M4L6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHFQ7M4L6 MFSD8-216ENST00000641147 4009 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 AC244517.1-201ENST00000606030 2086 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.58□□□□□ -1.84
SHFQ7M4L6 Y_RNA.6-201ENST00000362350 114 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 RNU4-1-201ENST00000363925 141 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 RNA5SP366-201ENST00000365454 123 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 RNU6-837P-201ENST00000391056 108 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 RNA5SP239-201ENST00000410218 129 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.58□□□□□ -1.84
SHFQ7M4L6 ISCA1P6-201ENST00000427740 390 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 BRWD1P3-201ENST00000428816 390 ntBASIC3.58□□□□□ -1.84
SHFQ7M4L6 C8orf59P1-201ENST00000429930 303 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms