Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC107214.2-201ENST00000608204 634 ntBASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 AC012360.2-201ENST00000609349 391 ntBASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 AL121772.2-201ENST00000614331 297 ntBASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 AC119674.1-207ENST00000641355 633 ntBASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SYNE3Q6ZMZ3 AL390237.1-201ENST00000404226 1415 ntBASIC4.21□□□□□ -1.73
SYNE3Q6ZMZ3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 RNU4-91P-201ENST00000364778 135 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 SNORD51-201ENST00000384320 80 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 AL355379.1-201ENST00000405542 640 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 ATP5A1P2-201ENST00000412323 255 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 AC009237.5-201ENST00000414271 501 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 MTATP6P27-201ENST00000416987 621 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 RPS27AP14-201ENST00000422868 454 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 CYCSP46-201ENST00000423569 204 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 BX119904.4-201ENST00000424402 301 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 CDC27P1-201ENST00000445384 715 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 RPS20P24-201ENST00000457473 361 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 MTND4LP3-201ENST00000468320 276 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 AC104563.1-201ENST00000476147 376 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 RAP1BP2-201ENST00000478270 544 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 TXNP6-201ENST00000510190 310 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 RNU2-27P-201ENST00000516185 142 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 RNU1-95P-201ENST00000516357 160 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 RNU1-128P-201ENST00000516704 160 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 RNU6-579P-201ENST00000516879 102 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 AP004247.1-201ENST00000531556 1289 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 EEF1B2P4-201ENST00000551398 348 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 GTF2IP22-201ENST00000554443 182 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 AC006130.2-201ENST00000586202 326 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 AC040904.1-201ENST00000590850 223 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 AL034351.1-201ENST00000605288 668 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 AL031775.1-201ENST00000607014 887 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 AP003355.3-201ENST00000623465 114 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 AC073073.2-201ENST00000609827 2578 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 TNPO1P3-201ENST00000436471 2662 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 AC007656.2-201ENST00000624902 4547 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 MFSD8-236ENST00000641509 4050 ntBASIC4.21□□□□□ -1.74
SYNE3Q6ZMZ3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 ZNF285B-201ENST00000561698 1767 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 AL133383.2-201ENST00000622958 2336 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 MTND4P16-201ENST00000466108 1367 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 RNU4-24P-201ENST00000364565 139 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 RNU6-769P-201ENST00000384407 104 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 HMGB1P11-201ENST00000413899 637 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 AC127526.1-201ENST00000417526 366 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 AL389915.1-201ENST00000422463 466 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 CKS1BP5-201ENST00000434172 273 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 COX6CP2-201ENST00000444980 225 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 BMI1P1-201ENST00000445879 941 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 EPS15P1-201ENST00000448836 336 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 RPL36AP33-201ENST00000450395 310 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 CFTRP1-201ENST00000456646 183 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 TPTE2P5-203ENST00000458118 728 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 AC023598.1-201ENST00000472521 361 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 PTGES3P3-201ENST00000511479 482 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 MTCO3P28-201ENST00000513351 515 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 RN7SKP116-201ENST00000516902 319 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 MTCYBP33-201ENST00000575007 1130 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 AC064872.1-201ENST00000604823 1072 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 AC097468.3-201ENST00000607956 456 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 AC073114.1-201ENST00000612027 490 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 CR392039.5-201ENST00000623201 510 ntBASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SYNE3Q6ZMZ3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SYNE3Q6ZMZ3 AC092447.10-201ENST00000620607 1652 ntBASIC4.19□□□□□ -1.74
SYNE3Q6ZMZ3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms