Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 PDCL2P2-201ENST00000533651 189 ntBASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 AC105224.1-201ENST00000587055 421 ntBASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 KLKP1-201ENST00000595979 403 ntBASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 AC022022.2-201ENST00000602989 360 ntBASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 AC063944.3-201ENST00000609969 533 ntBASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 AP004289.2-201ENST00000444413 1457 ntBASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 AC087359.1-201ENST00000508335 1740 ntBASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NHLRC1Q6VVB1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AP000526.1-201ENST00000603308 1388 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 RNU6-223P-201ENST00000362830 107 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 RNU6-289P-201ENST00000364093 107 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 RNU6-76P-201ENST00000384060 104 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 MIR493-201ENST00000385254 89 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 U3.20-201ENST00000390909 217 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AC007066.1-201ENST00000392902 381 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 RPL32P23-201ENST00000397237 405 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 RN7SKP285-201ENST00000410137 318 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 RN7SKP266-201ENST00000410232 287 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 RN7SKP202-201ENST00000410439 330 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AC009237.5-201ENST00000414271 501 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 MTND1P32-201ENST00000433043 938 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 TXNP1-201ENST00000441872 371 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AL590664.1-201ENST00000448065 339 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 MTND2P24-201ENST00000453434 806 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 U3.44-201ENST00000458938 192 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AC092754.2-201ENST00000463506 460 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 RPL7L1P8-201ENST00000469911 741 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 HMGN2P13-201ENST00000476476 274 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 RN7SL132P-201ENST00000478131 296 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 MTND2P14-201ENST00000482139 351 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 RPL32P34-201ENST00000486380 400 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AP002812.1-201ENST00000495378 474 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AC091951.3-201ENST00000504093 246 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 SNORA3.4-201ENST00000515969 96 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 SNORA70.16-201ENST00000516390 95 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 RNU6-579P-201ENST00000516879 102 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 RNU6-711P-201ENST00000517255 106 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AP006245.1-201ENST00000522549 120 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 MTCO1P49-201ENST00000523429 802 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AL121766.1-201ENST00000547436 487 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AC023161.2-201ENST00000551218 780 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AGGF1P5-201ENST00000567900 919 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AC034105.4-201ENST00000568304 277 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AC245389.1-201ENST00000605141 529 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AL133507.1-201ENST00000605269 557 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AC004908.3-201ENST00000610248 625 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AL450472.3-201ENST00000615578 367 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AC008443.7-201ENST00000622195 246 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AL732618.1-201ENST00000623251 301 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 AP000553.6-201ENST00000641242 118 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 DDX10P1-201ENST00000448545 1933 ntBASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NHLRC1Q6VVB1 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms