Protein–RNA interactions for Protein: Q13509

TUBB3, Tubulin beta-3 chain, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3Q13509 AC087385.1-201ENST00000475062 312 ntBASIC4.28□□□□□ -1.72
TUBB3Q13509 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.28□□□□□ -1.72
TUBB3Q13509 AC010587.1-201ENST00000505809 469 ntBASIC4.28□□□□□ -1.72
TUBB3Q13509 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.28□□□□□ -1.72
TUBB3Q13509 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.28□□□□□ -1.72
TUBB3Q13509 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.28□□□□□ -1.72
TUBB3Q13509 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.28□□□□□ -1.72
TUBB3Q13509 Y_RNA.702-201ENST00000516843 96 ntBASIC4.28□□□□□ -1.72
TUBB3Q13509 RN7SKP234-201ENST00000517173 224 ntBASIC4.28□□□□□ -1.72
TUBB3Q13509 MTND1P35-201ENST00000526739 508 ntBASIC4.28□□□□□ -1.72
TUBB3Q13509 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.28□□□□□ -1.72
TUBB3Q13509 AC025678.1-201ENST00000567861 338 ntBASIC4.28□□□□□ -1.72
TUBB3Q13509 AC090615.1-201ENST00000577519 154 ntBASIC4.28□□□□□ -1.72
TUBB3Q13509 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.28□□□□□ -1.72
TUBB3Q13509 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.28□□□□□ -1.72
TUBB3Q13509 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.28□□□□□ -1.72
TUBB3Q13509 AC068790.5-201ENST00000602741 355 ntBASIC4.28□□□□□ -1.72
TUBB3Q13509 AC012507.3-201ENST00000603556 477 ntBASIC4.28□□□□□ -1.72
TUBB3Q13509 ARF4P1-201ENST00000605447 541 ntBASIC4.28□□□□□ -1.72
TUBB3Q13509 AC105429.2-201ENST00000610567 517 ntBASIC4.28□□□□□ -1.72
TUBB3Q13509 AC012150.2-201ENST00000621300 544 ntBASIC4.28□□□□□ -1.72
TUBB3Q13509 AC008785.1-201ENST00000624475 456 ntBASIC4.28□□□□□ -1.72
TUBB3Q13509 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.28□□□□□ -1.72
TUBB3Q13509 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.28□□□□□ -1.72
TUBB3Q13509 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TUBB3Q13509 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.28□□□□□ -1.72
TUBB3Q13509 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TUBB3Q13509 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TUBB3Q13509 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.27□□□□□ -1.73
TUBB3Q13509 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TUBB3Q13509 AL136964.1-201ENST00000622038 2990 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
TUBB3Q13509 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TUBB3Q13509 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TUBB3Q13509 OR5P1P-201ENST00000299512 925 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
TUBB3Q13509 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TUBB3Q13509 Y_RNA.573-201ENST00000384763 105 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TUBB3Q13509 AMD1P2-201ENST00000412936 992 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 RPL31P2-201ENST00000413849 377 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 AC092832.1-201ENST00000422934 400 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.27□□□□□ -1.73
TUBB3Q13509 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.27□□□□□ -1.73
TUBB3Q13509 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.27□□□□□ -1.73
TUBB3Q13509 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.27□□□□□ -1.73
TUBB3Q13509 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TUBB3Q13509 SNRPEP8-201ENST00000442866 260 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.27□□□□□ -1.73
TUBB3Q13509 MTND3P10-201ENST00000450967 341 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 HMGB3P22-202ENST00000451823 572 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.27□□□□□ -1.73
TUBB3Q13509 RPL21P103-201ENST00000479921 488 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 AC108145.1-201ENST00000503770 153 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.27□□□□□ -1.73
TUBB3Q13509 AC114781.4-201ENST00000513707 639 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 SNORA20.3-201ENST00000516880 132 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 RN7SKP277-201ENST00000516895 283 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.27□□□□□ -1.73
TUBB3Q13509 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.27□□□□□ -1.73
TUBB3Q13509 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.27□□□□□ -1.73
TUBB3Q13509 AP003034.1-201ENST00000534621 422 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TUBB3Q13509 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.27□□□□□ -1.73
TUBB3Q13509 AL512310.1-201ENST00000548639 172 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.27□□□□□ -1.73
TUBB3Q13509 ADI1P3-201ENST00000549509 470 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.27□□□□□ -1.73
TUBB3Q13509 SUB1P2-201ENST00000556401 297 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 MIR3167-201ENST00000579623 85 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.27□□□□□ -1.73
TUBB3Q13509 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.27□□□□□ -1.73
TUBB3Q13509 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TUBB3Q13509 IPO5P1-202ENST00000600039 287 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 YWHAQP7-201ENST00000603536 658 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 LLPHP1-201ENST00000603571 367 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.27□□□□□ -1.73
TUBB3Q13509 AC114781.5-201ENST00000615297 108 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 MIR4727-201ENST00000622232 55 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.27□□□□□ -1.73
TUBB3Q13509 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TUBB3Q13509 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TUBB3Q13509 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.27□□□□□ -1.73
TUBB3Q13509 CASC19-280ENST00000642102 1351 ntBASIC4.27□□□□□ -1.73
TUBB3Q13509 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.26□□□□□ -1.73
TUBB3Q13509 ZNF962P-201ENST00000443465 3140 ntBASIC4.26□□□□□ -1.73
TUBB3Q13509 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
TUBB3Q13509 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.26□□□□□ -1.73
TUBB3Q13509 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.26□□□□□ -1.73
TUBB3Q13509 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TUBB3Q13509 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.26□□□□□ -1.73
TUBB3Q13509 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
TUBB3Q13509 RNU6-97P-201ENST00000363387 104 ntBASIC4.26□□□□□ -1.73
TUBB3Q13509 RN7SKP227-201ENST00000364445 330 ntBASIC4.26□□□□□ -1.73
TUBB3Q13509 SNORA70E-201ENST00000384492 135 ntBASIC4.26□□□□□ -1.73
TUBB3Q13509 Y_RNA.548-201ENST00000384656 105 ntBASIC4.26□□□□□ -1.73
TUBB3Q13509 RNU6-876P-201ENST00000391295 104 ntBASIC4.26□□□□□ -1.73
TUBB3Q13509 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.26□□□□□ -1.73
TUBB3Q13509 JKAMPP1-201ENST00000413804 919 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms