Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.3□□□□□ -1.88
SCN1BQ07699 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCN1BQ07699 RLIMP1-201ENST00000339626 1680 ntBASIC3.3□□□□□ -1.88
SCN1BQ07699 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SCN1BQ07699 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SCN1BQ07699 MAPK10-322ENST00000641485 4530 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.29□□□□□ -1.88
SCN1BQ07699 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SCN1BQ07699 RNA5SP97-201ENST00000365006 84 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 SNORA23-201ENST00000365128 182 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 RNA5SP88-201ENST00000365560 109 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SCN1BQ07699 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCN1BQ07699 RPS7P13-201ENST00000413955 498 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.29□□□□□ -1.88
SCN1BQ07699 AL590383.1-201ENST00000428602 75 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 AL035407.1-201ENST00000429211 571 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 BX679664.1-201ENST00000434429 253 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 TAAR7P-201ENST00000436141 242 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 AL591503.2-201ENST00000442314 1005 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.29□□□□□ -1.88
SCN1BQ07699 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.29□□□□□ -1.88
SCN1BQ07699 AC009237.8-201ENST00000445492 379 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 TPT1P14-201ENST00000448018 505 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.29□□□□□ -1.88
SCN1BQ07699 SNRPGP6-201ENST00000451124 220 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCN1BQ07699 RPS27P29-201ENST00000463110 252 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 AC034236.1-201ENST00000469891 373 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.29□□□□□ -1.88
SCN1BQ07699 RPS3AP6-201ENST00000484430 795 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 RPS4XP15-201ENST00000489210 795 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 AC106872.3-201ENST00000495104 446 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 FCF1P3-201ENST00000496394 590 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCN1BQ07699 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
SCN1BQ07699 AC021146.5-201ENST00000503544 545 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.29□□□□□ -1.88
SCN1BQ07699 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.29□□□□□ -1.88
SCN1BQ07699 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.29□□□□□ -1.88
SCN1BQ07699 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCN1BQ07699 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SCN1BQ07699 SCARNA15.2-201ENST00000516409 127 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 MRPS36P3-201ENST00000519284 130 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SCN1BQ07699 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.29□□□□□ -1.88
SCN1BQ07699 AC009097.3-201ENST00000563557 1018 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 AC120057.2-201ENST00000571520 271 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.29□□□□□ -1.88
SCN1BQ07699 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCN1BQ07699 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCN1BQ07699 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.29□□□□□ -1.88
SCN1BQ07699 VN1R92P-201ENST00000598511 928 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 MIR4275-201ENST00000636486 87 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 AC009902.3-201ENST00000606235 2172 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SCN1BQ07699 SDAD1P2-201ENST00000441308 2028 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 DDX10P1-201ENST00000448545 1933 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 ZNF826P-207ENST00000622273 1910 ntBASIC3.29□□□□□ -1.88
SCN1BQ07699 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SCN1BQ07699 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SCN1BQ07699 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SCN1BQ07699 MIR30E-201ENST00000362104 92 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 AP002088.1-201ENST00000382740 395 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 SNORA56-201ENST00000383966 129 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 RNU6-432P-201ENST00000384196 109 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 RNU6-253P-201ENST00000384730 105 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 MIR325-201ENST00000385260 98 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 AL022722.2-201ENST00000402519 180 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 RPL21P65-201ENST00000406094 466 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 AC016769.2-201ENST00000414815 475 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.28□□□□□ -1.88
SCN1BQ07699 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.28□□□□□ -1.88
SCN1BQ07699 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.28□□□□□ -1.88
SCN1BQ07699 AL445669.1-201ENST00000426743 755 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.28□□□□□ -1.88
SCN1BQ07699 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.28□□□□□ -1.88
SCN1BQ07699 AC125238.1-201ENST00000448842 249 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.28□□□□□ -1.88
SCN1BQ07699 RPS7P7-201ENST00000463499 571 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SCN1BQ07699 AP002884.2-201ENST00000471647 395 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.28□□□□□ -1.88
SCN1BQ07699 AC020893.1-201ENST00000502452 580 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.28□□□□□ -1.88
SCN1BQ07699 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.28□□□□□ -1.88
SCN1BQ07699 HMGN1P28-201ENST00000521340 364 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 AC022695.1-201ENST00000522089 237 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 IGHV3-76-201ENST00000522465 295 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 AC013828.2-201ENST00000532487 235 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.28□□□□□ -1.88
SCN1BQ07699 OR7K1P-201ENST00000546439 926 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 AC124947.2-202ENST00000552735 133 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 OR4T1P-201ENST00000554933 911 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.28□□□□□ -1.88
SCN1BQ07699 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.28□□□□□ -1.88
SCN1BQ07699 MIR3609-201ENST00000582661 80 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 MIR4760-201ENST00000585040 80 ntBASIC3.28□□□□□ -1.88
SCN1BQ07699 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.28□□□□□ -1.88
SCN1BQ07699 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms