Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.74□□□□□ -1.97
VSX2P58304 RPL21P136-201ENST00000605378 396 ntBASIC2.74□□□□□ -1.97
VSX2P58304 AL627309.6-201ENST00000606857 840 ntBASIC2.74□□□□□ -1.97
VSX2P58304 AC069234.5-201ENST00000611056 416 ntBASIC2.74□□□□□ -1.97
VSX2P58304 AC008083.4-201ENST00000615076 444 ntBASIC2.74□□□□□ -1.97
VSX2P58304 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VSX2P58304 AC009318.4-201ENST00000620496 486 ntBASIC2.74□□□□□ -1.97
VSX2P58304 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.74□□□□□ -1.97
VSX2P58304 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.74□□□□□ -1.97
VSX2P58304 AC096644.4-201ENST00000563417 2912 ntBASIC2.74□□□□□ -1.97
VSX2P58304 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.74□□□□□ -1.97
VSX2P58304 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
VSX2P58304 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.73□□□□□ -1.97
VSX2P58304 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.73□□□□□ -1.97
VSX2P58304 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
VSX2P58304 RNU5B-4P-201ENST00000363508 111 ntBASIC2.73□□□□□ -1.97
VSX2P58304 RNU6-821P-201ENST00000390995 107 ntBASIC2.73□□□□□ -1.97
VSX2P58304 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.73□□□□□ -1.97
VSX2P58304 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.73□□□□□ -1.97
VSX2P58304 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.73□□□□□ -1.97
VSX2P58304 AC092634.6-201ENST00000418558 192 ntBASIC2.73□□□□□ -1.97
VSX2P58304 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.73□□□□□ -1.97
VSX2P58304 AL139281.1-201ENST00000422120 335 ntBASIC2.73□□□□□ -1.97
VSX2P58304 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.73□□□□□ -1.97
VSX2P58304 AC236972.1-201ENST00000433225 199 ntBASIC2.73□□□□□ -1.97
VSX2P58304 RPL21P2-201ENST00000440049 481 ntBASIC2.73□□□□□ -1.97
VSX2P58304 AL592437.1-201ENST00000443781 492 ntBASIC2.73□□□□□ -1.97
VSX2P58304 AC004022.1-201ENST00000447766 1066 ntBASIC2.73□□□□□ -1.97
VSX2P58304 AL445669.2-201ENST00000454425 421 ntBASIC2.73□□□□□ -1.97
VSX2P58304 AC244505.3-201ENST00000454598 187 ntBASIC2.73□□□□□ -1.97
VSX2P58304 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VSX2P58304 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.73□□□□□ -1.97
VSX2P58304 GAPDHP39-201ENST00000481866 979 ntBASIC2.73□□□□□ -1.97
VSX2P58304 VPS26AP1-201ENST00000483197 979 ntBASIC2.73□□□□□ -1.97
VSX2P58304 AC096751.1-202ENST00000502691 1067 ntBASIC2.73□□□□□ -1.97
VSX2P58304 AC093767.1-201ENST00000504523 156 ntBASIC2.73□□□□□ -1.97
VSX2P58304 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.73□□□□□ -1.97
VSX2P58304 AC026801.2-201ENST00000515352 425 ntBASIC2.73□□□□□ -1.97
VSX2P58304 AC112198.4-201ENST00000515450 351 ntBASIC2.73□□□□□ -1.97
VSX2P58304 SNORA48.10-201ENST00000516965 160 ntBASIC2.73□□□□□ -1.97
VSX2P58304 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.73□□□□□ -1.97
VSX2P58304 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.73□□□□□ -1.97
VSX2P58304 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.73□□□□□ -1.97
VSX2P58304 AC093519.1-201ENST00000566109 298 ntBASIC2.73□□□□□ -1.97
VSX2P58304 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.73□□□□□ -1.97
VSX2P58304 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.73□□□□□ -1.97
VSX2P58304 BDH2P1-201ENST00000602288 736 ntBASIC2.73□□□□□ -1.97
VSX2P58304 AC024153.1-201ENST00000603103 365 ntBASIC2.73□□□□□ -1.97
VSX2P58304 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.73□□□□□ -1.97
VSX2P58304 DPRXP5-201ENST00000604662 539 ntBASIC2.73□□□□□ -1.97
VSX2P58304 AC128687.1-201ENST00000605304 619 ntBASIC2.73□□□□□ -1.97
VSX2P58304 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.73□□□□□ -1.97
VSX2P58304 AC120053.1-201ENST00000607706 736 ntBASIC2.73□□□□□ -1.97
VSX2P58304 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.73□□□□□ -1.97
VSX2P58304 AC091925.2-201ENST00000625059 256 ntBASIC2.73□□□□□ -1.97
VSX2P58304 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VSX2P58304 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VSX2P58304 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VSX2P58304 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.73□□□□□ -1.97
VSX2P58304 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.73□□□□□ -1.97
VSX2P58304 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VSX2P58304 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VSX2P58304 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VSX2P58304 Y_RNA.500-201ENST00000384466 111 ntBASIC2.72□□□□□ -1.97
VSX2P58304 MIR181B1-201ENST00000385240 110 ntBASIC2.72□□□□□ -1.97
VSX2P58304 RPL31P1-201ENST00000398116 372 ntBASIC2.72□□□□□ -1.97
VSX2P58304 AL355615.1-201ENST00000406187 641 ntBASIC2.72□□□□□ -1.97
VSX2P58304 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VSX2P58304 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.72□□□□□ -1.97
VSX2P58304 RPL7P10-201ENST00000417407 739 ntBASIC2.72□□□□□ -1.97
VSX2P58304 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.72□□□□□ -1.97
VSX2P58304 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.72□□□□□ -1.97
VSX2P58304 AC013262.1-201ENST00000426710 252 ntBASIC2.72□□□□□ -1.97
VSX2P58304 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.72□□□□□ -1.97
VSX2P58304 RPS20P24-201ENST00000457473 361 ntBASIC2.72□□□□□ -1.97
VSX2P58304 AC015908.1-201ENST00000478739 476 ntBASIC2.72□□□□□ -1.97
VSX2P58304 RN7SL499P-201ENST00000481141 276 ntBASIC2.72□□□□□ -1.97
VSX2P58304 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.72□□□□□ -1.97
VSX2P58304 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.72□□□□□ -1.97
VSX2P58304 HIGD1AP13-201ENST00000509878 289 ntBASIC2.72□□□□□ -1.97
VSX2P58304 RNA5SP367-201ENST00000516557 118 ntBASIC2.72□□□□□ -1.97
VSX2P58304 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.72□□□□□ -1.97
VSX2P58304 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.72□□□□□ -1.97
VSX2P58304 AC092451.2-201ENST00000538746 658 ntBASIC2.72□□□□□ -1.97
VSX2P58304 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.72□□□□□ -1.97
VSX2P58304 AC034105.3-201ENST00000565294 442 ntBASIC2.72□□□□□ -1.97
VSX2P58304 CYCSP39-201ENST00000565821 309 ntBASIC2.72□□□□□ -1.97
VSX2P58304 SNORD84-203ENST00000584275 78 ntBASIC2.72□□□□□ -1.97
VSX2P58304 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.72□□□□□ -1.97
VSX2P58304 AP003973.1-201ENST00000604639 691 ntBASIC2.72□□□□□ -1.97
VSX2P58304 AL033523.1-201ENST00000605153 153 ntBASIC2.72□□□□□ -1.97
VSX2P58304 AL583856.2-201ENST00000606298 543 ntBASIC2.72□□□□□ -1.97
VSX2P58304 AC131902.3-201ENST00000611767 581 ntBASIC2.72□□□□□ -1.97
VSX2P58304 AC073348.1-201ENST00000623002 331 ntBASIC2.72□□□□□ -1.97
VSX2P58304 AC080188.3-201ENST00000624842 748 ntBASIC2.72□□□□□ -1.97
VSX2P58304 AC006927.2-201ENST00000639256 389 ntBASIC2.72□□□□□ -1.97
VSX2P58304 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.72□□□□□ -1.97
VSX2P58304 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VSX2P58304 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.72□□□□□ -1.97
VSX2P58304 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms