Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PEX3P56589 MTND4P34-201ENST00000572715 1371 ntBASIC3.37□□□□□ -1.87
PEX3P56589 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.36□□□□□ -1.87
PEX3P56589 SNORA71.1-201ENST00000364523 117 ntBASIC3.36□□□□□ -1.87
PEX3P56589 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PEX3P56589 RNU6-157P-201ENST00000383957 107 ntBASIC3.36□□□□□ -1.87
PEX3P56589 SNORA48.2-201ENST00000390926 124 ntBASIC3.36□□□□□ -1.87
PEX3P56589 SNORA48.5-201ENST00000391143 135 ntBASIC3.36□□□□□ -1.87
PEX3P56589 AL024474.1-201ENST00000404655 591 ntBASIC3.36□□□□□ -1.87
PEX3P56589 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.36□□□□□ -1.87
PEX3P56589 AL008987.1-201ENST00000415528 237 ntBASIC3.36□□□□□ -1.87
PEX3P56589 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.36□□□□□ -1.87
PEX3P56589 MTND1P32-201ENST00000433043 938 ntBASIC3.36□□□□□ -1.87
PEX3P56589 ATP5F1P1-201ENST00000433775 569 ntBASIC3.36□□□□□ -1.87
PEX3P56589 CYCSP32-201ENST00000440548 321 ntBASIC3.36□□□□□ -1.87
PEX3P56589 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.36□□□□□ -1.87
PEX3P56589 MTCYBP11-201ENST00000447254 1109 ntBASIC3.36□□□□□ -1.87
PEX3P56589 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.36□□□□□ -1.87
PEX3P56589 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.36□□□□□ -1.87
PEX3P56589 NECAP1P2-201ENST00000455668 727 ntBASIC3.36□□□□□ -1.87
PEX3P56589 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.36□□□□□ -1.87
PEX3P56589 HMGB3P30-201ENST00000457863 606 ntBASIC3.36□□□□□ -1.87
PEX3P56589 RN7SL20P-201ENST00000488827 297 ntBASIC3.36□□□□□ -1.87
PEX3P56589 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.36□□□□□ -1.87
PEX3P56589 AC034244.1-201ENST00000507687 207 ntBASIC3.36□□□□□ -1.87
PEX3P56589 HMGB1P28-201ENST00000507778 552 ntBASIC3.36□□□□□ -1.87
PEX3P56589 AC116353.3-201ENST00000511215 249 ntBASIC3.36□□□□□ -1.87
PEX3P56589 RNU5A-4P-201ENST00000516588 111 ntBASIC3.36□□□□□ -1.87
PEX3P56589 IGKV2D-36-201ENST00000518643 226 ntBASIC3.36□□□□□ -1.87
PEX3P56589 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.36□□□□□ -1.87
PEX3P56589 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.36□□□□□ -1.87
PEX3P56589 AC023538.1-201ENST00000534576 736 ntBASIC3.36□□□□□ -1.87
PEX3P56589 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PEX3P56589 AC010198.2-201ENST00000550612 259 ntBASIC3.36□□□□□ -1.87
PEX3P56589 AL121603.1-201ENST00000553815 142 ntBASIC3.36□□□□□ -1.87
PEX3P56589 OR4H12P-201ENST00000556269 907 ntBASIC3.36□□□□□ -1.87
PEX3P56589 AC087465.1-201ENST00000560574 245 ntBASIC3.36□□□□□ -1.87
PEX3P56589 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.36□□□□□ -1.87
PEX3P56589 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.36□□□□□ -1.87
PEX3P56589 MIR4325-201ENST00000583049 90 ntBASIC3.36□□□□□ -1.87
PEX3P56589 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.36□□□□□ -1.87
PEX3P56589 AC131235.4-201ENST00000609288 620 ntBASIC3.36□□□□□ -1.87
PEX3P56589 AC009318.4-201ENST00000620496 486 ntBASIC3.36□□□□□ -1.87
PEX3P56589 AC091953.5-201ENST00000622919 233 ntBASIC3.36□□□□□ -1.87
PEX3P56589 AC138649.5-201ENST00000637456 137 ntBASIC3.36□□□□□ -1.87
PEX3P56589 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PEX3P56589 AC118273.1-201ENST00000525324 3006 ntBASIC3.36□□□□□ -1.87
PEX3P56589 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PEX3P56589 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PEX3P56589 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PEX3P56589 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.35□□□□□ -1.87
PEX3P56589 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.35□□□□□ -1.87
PEX3P56589 RNU6-356P-201ENST00000384140 107 ntBASIC3.35□□□□□ -1.87
PEX3P56589 RNU6-339P-201ENST00000384310 107 ntBASIC3.35□□□□□ -1.87
PEX3P56589 MIR128-1-201ENST00000384921 82 ntBASIC3.35□□□□□ -1.87
PEX3P56589 AC119751.3-201ENST00000399720 670 ntBASIC3.35□□□□□ -1.87
PEX3P56589 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.35□□□□□ -1.87
PEX3P56589 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.35□□□□□ -1.87
PEX3P56589 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.35□□□□□ -1.87
PEX3P56589 AC012498.1-201ENST00000424037 437 ntBASIC3.35□□□□□ -1.87
PEX3P56589 PSMA2P3-201ENST00000429685 675 ntBASIC3.35□□□□□ -1.87
PEX3P56589 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PEX3P56589 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.35□□□□□ -1.87
PEX3P56589 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.35□□□□□ -1.87
PEX3P56589 AC125238.1-201ENST00000448842 249 ntBASIC3.35□□□□□ -1.87
PEX3P56589 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.35□□□□□ -1.87
PEX3P56589 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.35□□□□□ -1.87
PEX3P56589 AL139824.2-201ENST00000458731 1095 ntBASIC3.35□□□□□ -1.87
PEX3P56589 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.35□□□□□ -1.87
PEX3P56589 RPL27AP5-201ENST00000469428 449 ntBASIC3.35□□□□□ -1.87
PEX3P56589 AC010301.1-201ENST00000473936 355 ntBASIC3.35□□□□□ -1.87
PEX3P56589 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.35□□□□□ -1.87
PEX3P56589 MTCYBP35-201ENST00000503630 1137 ntBASIC3.35□□□□□ -1.87
PEX3P56589 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PEX3P56589 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.35□□□□□ -1.87
PEX3P56589 AC109445.1-201ENST00000512356 383 ntBASIC3.35□□□□□ -1.87
PEX3P56589 RNY4P37-201ENST00000516225 96 ntBASIC3.35□□□□□ -1.87
PEX3P56589 RN7SKP272-201ENST00000516988 232 ntBASIC3.35□□□□□ -1.87
PEX3P56589 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.35□□□□□ -1.87
PEX3P56589 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.35□□□□□ -1.87
PEX3P56589 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.35□□□□□ -1.87
PEX3P56589 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.35□□□□□ -1.87
PEX3P56589 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PEX3P56589 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.35□□□□□ -1.87
PEX3P56589 DUXAP1-201ENST00000556632 463 ntBASIC3.35□□□□□ -1.87
PEX3P56589 Z99289.3-201ENST00000605586 594 ntBASIC3.35□□□□□ -1.87
PEX3P56589 AC097478.2-201ENST00000610572 514 ntBASIC3.35□□□□□ -1.87
PEX3P56589 AC090116.1-201ENST00000615679 446 ntBASIC3.35□□□□□ -1.87
PEX3P56589 AC140725.3-201ENST00000616193 880 ntBASIC3.35□□□□□ -1.87
PEX3P56589 ATP5A1P2-202ENST00000616464 443 ntBASIC3.35□□□□□ -1.87
PEX3P56589 AP000484.1-201ENST00000620067 1252 ntBASIC3.35□□□□□ -1.87
PEX3P56589 AP002782.1-201ENST00000623107 614 ntBASIC3.35□□□□□ -1.87
PEX3P56589 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PEX3P56589 AL021368.2-201ENST00000606125 5352 ntBASIC3.35□□□□□ -1.87
PEX3P56589 AL672296.1-201ENST00000427780 2158 ntBASIC3.35□□□□□ -1.87
PEX3P56589 ZNF734P-201ENST00000419494 1534 ntBASIC3.34□□□□□ -1.87
PEX3P56589 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PEX3P56589 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PEX3P56589 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.34□□□□□ -1.87
PEX3P56589 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms