Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDH4P55283 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.02□□□□□ -1.93
CDH4P55283 AC006927.2-201ENST00000639256 389 ntBASIC3.02□□□□□ -1.93
CDH4P55283 AC004972.1-201ENST00000623934 2209 ntBASIC3.02□□□□□ -1.93
CDH4P55283 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDH4P55283 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDH4P55283 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDH4P55283 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDH4P55283 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.01□□□□□ -1.93
CDH4P55283 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDH4P55283 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.01□□□□□ -1.93
CDH4P55283 RNU5B-4P-201ENST00000363508 111 ntBASIC3.01□□□□□ -1.93
CDH4P55283 RNU6-878P-201ENST00000384578 110 ntBASIC3.01□□□□□ -1.93
CDH4P55283 MIR493-201ENST00000385254 89 ntBASIC3.01□□□□□ -1.93
CDH4P55283 MIR887-201ENST00000401258 79 ntBASIC3.01□□□□□ -1.93
CDH4P55283 RPL7P27-201ENST00000403775 720 ntBASIC3.01□□□□□ -1.93
CDH4P55283 RNA5SP38-201ENST00000410750 119 ntBASIC3.01□□□□□ -1.93
CDH4P55283 BTF3P8-201ENST00000414577 526 ntBASIC3.01□□□□□ -1.93
CDH4P55283 USP9YP36-201ENST00000424581 829 ntBASIC3.01□□□□□ -1.93
CDH4P55283 PSMA6P3-201ENST00000428242 164 ntBASIC3.01□□□□□ -1.93
CDH4P55283 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.01□□□□□ -1.93
CDH4P55283 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH4P55283 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.01□□□□□ -1.93
CDH4P55283 AL162389.1-201ENST00000449233 177 ntBASIC3.01□□□□□ -1.93
CDH4P55283 AC244505.3-201ENST00000454598 187 ntBASIC3.01□□□□□ -1.93
CDH4P55283 RN7SL283P-201ENST00000489055 303 ntBASIC3.01□□□□□ -1.93
CDH4P55283 NAMPTP2-201ENST00000505629 1115 ntBASIC3.01□□□□□ -1.93
CDH4P55283 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH4P55283 MTCO3P27-201ENST00000514397 196 ntBASIC3.01□□□□□ -1.93
CDH4P55283 SNORA31.1-201ENST00000515993 133 ntBASIC3.01□□□□□ -1.93
CDH4P55283 RN7SKP43-201ENST00000516173 320 ntBASIC3.01□□□□□ -1.93
CDH4P55283 SNORA31.5-201ENST00000516190 133 ntBASIC3.01□□□□□ -1.93
CDH4P55283 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.01□□□□□ -1.93
CDH4P55283 OR4R2P-201ENST00000530815 597 ntBASIC3.01□□□□□ -1.93
CDH4P55283 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH4P55283 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDH4P55283 MAGOH2P-202ENST00000584384 429 ntBASIC3.01□□□□□ -1.93
CDH4P55283 AC015871.2-201ENST00000603605 948 ntBASIC3.01□□□□□ -1.93
CDH4P55283 AL022099.1-201ENST00000604551 712 ntBASIC3.01□□□□□ -1.93
CDH4P55283 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.01□□□□□ -1.93
CDH4P55283 CUL1P1-201ENST00000509510 2425 ntBASIC3□□□□□ -1.93
CDH4P55283 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDH4P55283 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDH4P55283 MIR148B-201ENST00000362252 99 ntBASIC3□□□□□ -1.93
CDH4P55283 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3□□□□□ -1.93
CDH4P55283 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3□□□□□ -1.93
CDH4P55283 AL137014.1-201ENST00000420490 1226 ntBASIC3□□□□□ -1.93
CDH4P55283 AC104332.2-201ENST00000429959 156 ntBASIC3□□□□□ -1.93
CDH4P55283 AL139132.1-201ENST00000431587 344 ntBASIC3□□□□□ -1.93
CDH4P55283 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CDH4P55283 AC004866.2-201ENST00000438285 481 ntBASIC3□□□□□ -1.93
CDH4P55283 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3□□□□□ -1.93
CDH4P55283 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3□□□□□ -1.93
CDH4P55283 Z82190.1-201ENST00000454534 490 ntBASIC3□□□□□ -1.93
CDH4P55283 RPS29P26-201ENST00000477483 171 ntBASIC3□□□□□ -1.93
CDH4P55283 RPL30P14-201ENST00000482744 348 ntBASIC3□□□□□ -1.93
CDH4P55283 RPS3AP14-201ENST00000483907 780 ntBASIC3□□□□□ -1.93
CDH4P55283 OR4G11P-201ENST00000492842 939 ntBASIC3□□□□□ -1.93
CDH4P55283 ARL4AP2-201ENST00000507378 601 ntBASIC3□□□□□ -1.93
CDH4P55283 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3□□□□□ -1.93
CDH4P55283 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3□□□□□ -1.93
CDH4P55283 AC027309.2-201ENST00000520566 192 ntBASIC3□□□□□ -1.93
CDH4P55283 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3□□□□□ -1.93
CDH4P55283 AC007536.1-201ENST00000533382 349 ntBASIC3□□□□□ -1.93
CDH4P55283 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3□□□□□ -1.93
CDH4P55283 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3□□□□□ -1.93
CDH4P55283 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3□□□□□ -1.93
CDH4P55283 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3□□□□□ -1.93
CDH4P55283 AP005205.1-201ENST00000563503 508 ntBASIC3□□□□□ -1.93
CDH4P55283 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3□□□□□ -1.93
CDH4P55283 AC106791.2-201ENST00000604680 391 ntBASIC3□□□□□ -1.93
CDH4P55283 AC120053.1-201ENST00000607706 736 ntBASIC3□□□□□ -1.93
CDH4P55283 AC131902.3-201ENST00000611767 581 ntBASIC3□□□□□ -1.93
CDH4P55283 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3□□□□□ -1.93
CDH4P55283 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDH4P55283 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDH4P55283 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDH4P55283 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDH4P55283 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.99□□□□□ -1.93
CDH4P55283 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.99□□□□□ -1.93
CDH4P55283 AL136520.1-201ENST00000600311 1322 ntBASIC2.99□□□□□ -1.93
CDH4P55283 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.99□□□□□ -1.93
CDH4P55283 AC011460.1-201ENST00000636268 1834 ntBASIC2.99□□□□□ -1.93
CDH4P55283 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CDH4P55283 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.99□□□□□ -1.93
CDH4P55283 SNORA63.3-201ENST00000362682 132 ntBASIC2.99□□□□□ -1.93
CDH4P55283 RNU5D-1-201ENST00000363299 116 ntBASIC2.99□□□□□ -1.93
CDH4P55283 SUGT1P1-201ENST00000379514 476 ntBASIC2.99□□□□□ -1.93
CDH4P55283 RPL21P3-201ENST00000395517 478 ntBASIC2.99□□□□□ -1.93
CDH4P55283 RPS4XP3-201ENST00000398541 413 ntBASIC2.99□□□□□ -1.93
CDH4P55283 NDUFB4P4-201ENST00000404822 243 ntBASIC2.99□□□□□ -1.93
CDH4P55283 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.99□□□□□ -1.93
CDH4P55283 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.99□□□□□ -1.93
CDH4P55283 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.99□□□□□ -1.93
CDH4P55283 AC091390.3-201ENST00000426478 338 ntBASIC2.99□□□□□ -1.93
CDH4P55283 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.99□□□□□ -1.93
CDH4P55283 OR6K5P-201ENST00000447050 945 ntBASIC2.99□□□□□ -1.93
CDH4P55283 AC146507.2-201ENST00000460608 476 ntBASIC2.99□□□□□ -1.93
CDH4P55283 AC104472.2-201ENST00000469035 601 ntBASIC2.99□□□□□ -1.93
CDH4P55283 KLRA1P-201ENST00000503499 986 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms