Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC092447.6-201ENST00000414578 210 ntBASIC4.28□□□□□ -1.72
COPAP53621 HMGB3P23-201ENST00000414981 585 ntBASIC4.28□□□□□ -1.72
COPAP53621 AC244098.2-201ENST00000422068 99 ntBASIC4.28□□□□□ -1.72
COPAP53621 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.28□□□□□ -1.72
COPAP53621 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.28□□□□□ -1.72
COPAP53621 UBE2V1P13-201ENST00000436983 439 ntBASIC4.28□□□□□ -1.72
COPAP53621 AC108734.1-201ENST00000439549 399 ntBASIC4.28□□□□□ -1.72
COPAP53621 RPL21P89-201ENST00000444021 467 ntBASIC4.28□□□□□ -1.72
COPAP53621 AC098824.1-201ENST00000453565 980 ntBASIC4.28□□□□□ -1.72
COPAP53621 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.28□□□□□ -1.72
COPAP53621 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.28□□□□□ -1.72
COPAP53621 HMGB1P25-201ENST00000468402 607 ntBASIC4.28□□□□□ -1.72
COPAP53621 ACTR3P3-201ENST00000480448 893 ntBASIC4.28□□□□□ -1.72
COPAP53621 RPS26P15-201ENST00000488067 348 ntBASIC4.28□□□□□ -1.72
COPAP53621 MTND2P33-201ENST00000506452 1031 ntBASIC4.28□□□□□ -1.72
COPAP53621 NDUFB4P2-201ENST00000509515 391 ntBASIC4.28□□□□□ -1.72
COPAP53621 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COPAP53621 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.28□□□□□ -1.72
COPAP53621 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.28□□□□□ -1.72
COPAP53621 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.28□□□□□ -1.72
COPAP53621 SETP7-201ENST00000552169 453 ntBASIC4.28□□□□□ -1.72
COPAP53621 AC034105.4-201ENST00000568304 277 ntBASIC4.28□□□□□ -1.72
COPAP53621 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.28□□□□□ -1.72
COPAP53621 AC009977.1-201ENST00000586015 570 ntBASIC4.28□□□□□ -1.72
COPAP53621 AP003465.2-201ENST00000602571 373 ntBASIC4.28□□□□□ -1.72
COPAP53621 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.28□□□□□ -1.72
COPAP53621 AC107304.1-201ENST00000604229 296 ntBASIC4.28□□□□□ -1.72
COPAP53621 OR10AB1P-201ENST00000609613 938 ntBASIC4.28□□□□□ -1.72
COPAP53621 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COPAP53621 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COPAP53621 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.28□□□□□ -1.72
COPAP53621 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COPAP53621 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COPAP53621 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COPAP53621 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COPAP53621 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COPAP53621 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COPAP53621 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.27□□□□□ -1.73
COPAP53621 ZNF962P-201ENST00000443465 3140 ntBASIC4.27□□□□□ -1.73
COPAP53621 RLIMP1-201ENST00000339626 1680 ntBASIC4.27□□□□□ -1.73
COPAP53621 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
COPAP53621 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.27□□□□□ -1.73
COPAP53621 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
COPAP53621 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
COPAP53621 RNU5A-6P-201ENST00000384136 116 ntBASIC4.27□□□□□ -1.73
COPAP53621 U3.20-201ENST00000390909 217 ntBASIC4.27□□□□□ -1.73
COPAP53621 FCF1P10-201ENST00000407590 479 ntBASIC4.27□□□□□ -1.73
COPAP53621 RNU2-47P-201ENST00000410649 186 ntBASIC4.27□□□□□ -1.73
COPAP53621 RBMY1KP-201ENST00000423480 476 ntBASIC4.27□□□□□ -1.73
COPAP53621 AC104651.1-201ENST00000427559 735 ntBASIC4.27□□□□□ -1.73
COPAP53621 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.27□□□□□ -1.73
COPAP53621 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.27□□□□□ -1.73
COPAP53621 RPL21P104-201ENST00000464143 478 ntBASIC4.27□□□□□ -1.73
COPAP53621 RN7SL585P-201ENST00000470538 280 ntBASIC4.27□□□□□ -1.73
COPAP53621 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.27□□□□□ -1.73
COPAP53621 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.27□□□□□ -1.73
COPAP53621 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.27□□□□□ -1.73
COPAP53621 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.27□□□□□ -1.73
COPAP53621 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.27□□□□□ -1.73
COPAP53621 AC009063.1-201ENST00000563342 702 ntBASIC4.27□□□□□ -1.73
COPAP53621 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.27□□□□□ -1.73
COPAP53621 HMGN2P28-201ENST00000606102 262 ntBASIC4.27□□□□□ -1.73
COPAP53621 AC012603.1-201ENST00000606424 528 ntBASIC4.27□□□□□ -1.73
COPAP53621 RNU4-89P-201ENST00000607443 133 ntBASIC4.27□□□□□ -1.73
COPAP53621 AC103710.1-201ENST00000610003 901 ntBASIC4.27□□□□□ -1.73
COPAP53621 AC079597.1-201ENST00000624306 508 ntBASIC4.27□□□□□ -1.73
COPAP53621 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COPAP53621 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
COPAP53621 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COPAP53621 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COPAP53621 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.26□□□□□ -1.73
COPAP53621 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COPAP53621 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COPAP53621 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.26□□□□□ -1.73
COPAP53621 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COPAP53621 AC116096.1-201ENST00000566804 2314 ntBASIC4.26□□□□□ -1.73
COPAP53621 FRG1BP-201ENST00000278882 761 ntBASIC4.26□□□□□ -1.73
COPAP53621 Y_RNA.41-201ENST00000362646 102 ntBASIC4.26□□□□□ -1.73
COPAP53621 RNU6-1249P-201ENST00000363237 111 ntBASIC4.26□□□□□ -1.73
COPAP53621 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COPAP53621 RNU6-259P-201ENST00000383999 107 ntBASIC4.26□□□□□ -1.73
COPAP53621 Y_RNA.516-201ENST00000384541 124 ntBASIC4.26□□□□□ -1.73
COPAP53621 SNORD115.1-201ENST00000391109 76 ntBASIC4.26□□□□□ -1.73
COPAP53621 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
COPAP53621 RNU6-248P-201ENST00000410720 107 ntBASIC4.26□□□□□ -1.73
COPAP53621 RNA5SP306-201ENST00000411087 107 ntBASIC4.26□□□□□ -1.73
COPAP53621 RPS3AP3-201ENST00000411933 242 ntBASIC4.26□□□□□ -1.73
COPAP53621 FCF1P9-201ENST00000412546 282 ntBASIC4.26□□□□□ -1.73
COPAP53621 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.26□□□□□ -1.73
COPAP53621 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.26□□□□□ -1.73
COPAP53621 SPA17P1-201ENST00000416656 452 ntBASIC4.26□□□□□ -1.73
COPAP53621 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COPAP53621 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.26□□□□□ -1.73
COPAP53621 AC073614.1-201ENST00000438690 650 ntBASIC4.26□□□□□ -1.73
COPAP53621 AL031667.1-201ENST00000440222 725 ntBASIC4.26□□□□□ -1.73
COPAP53621 AL162151.2-201ENST00000448875 158 ntBASIC4.26□□□□□ -1.73
COPAP53621 AC104308.1-201ENST00000454621 333 ntBASIC4.26□□□□□ -1.73
COPAP53621 RNA5SP246-201ENST00000458909 119 ntBASIC4.26□□□□□ -1.73
COPAP53621 RPL9P33-201ENST00000484311 566 ntBASIC4.26□□□□□ -1.73
COPAP53621 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms