Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
SMSP52788 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMSP52788 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.3□□□□□ -1.88
SMSP52788 AC009812.4-201ENST00000569134 1805 ntBASIC3.3□□□□□ -1.88
SMSP52788 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMSP52788 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.3□□□□□ -1.88
SMSP52788 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SMSP52788 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SMSP52788 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SMSP52788 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SMSP52788 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SMSP52788 FRG1BP-201ENST00000278882 761 ntBASIC3.29□□□□□ -1.88
SMSP52788 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SMSP52788 SNORA38.1-201ENST00000364172 131 ntBASIC3.29□□□□□ -1.88
SMSP52788 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.29□□□□□ -1.88
SMSP52788 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SMSP52788 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SMSP52788 RNU6-55P-201ENST00000411092 107 ntBASIC3.29□□□□□ -1.88
SMSP52788 RNU6-954P-201ENST00000411355 107 ntBASIC3.29□□□□□ -1.88
SMSP52788 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.29□□□□□ -1.88
SMSP52788 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.29□□□□□ -1.88
SMSP52788 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.29□□□□□ -1.88
SMSP52788 CYCSP4-201ENST00000429682 331 ntBASIC3.29□□□□□ -1.88
SMSP52788 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.29□□□□□ -1.88
SMSP52788 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.29□□□□□ -1.88
SMSP52788 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.29□□□□□ -1.88
SMSP52788 COX7BP2-201ENST00000437976 242 ntBASIC3.29□□□□□ -1.88
SMSP52788 HIGD1AP11-201ENST00000438361 280 ntBASIC3.29□□□□□ -1.88
SMSP52788 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.29□□□□□ -1.88
SMSP52788 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.29□□□□□ -1.88
SMSP52788 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.29□□□□□ -1.88
SMSP52788 RPL17P49-201ENST00000443728 411 ntBASIC3.29□□□□□ -1.88
SMSP52788 OR6K5P-201ENST00000447050 945 ntBASIC3.29□□□□□ -1.88
SMSP52788 RPS23P3-201ENST00000470993 430 ntBASIC3.29□□□□□ -1.88
SMSP52788 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.29□□□□□ -1.88
SMSP52788 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.29□□□□□ -1.88
SMSP52788 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.29□□□□□ -1.88
SMSP52788 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.29□□□□□ -1.88
SMSP52788 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.29□□□□□ -1.88
SMSP52788 AC022483.1-201ENST00000514020 567 ntBASIC3.29□□□□□ -1.88
SMSP52788 COX6CP8-201ENST00000522620 226 ntBASIC3.29□□□□□ -1.88
SMSP52788 AC103843.2-201ENST00000530523 682 ntBASIC3.29□□□□□ -1.88
SMSP52788 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.29□□□□□ -1.88
SMSP52788 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SMSP52788 AC023161.2-201ENST00000551218 780 ntBASIC3.29□□□□□ -1.88
SMSP52788 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.29□□□□□ -1.88
SMSP52788 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.29□□□□□ -1.88
SMSP52788 AP005205.1-201ENST00000563503 508 ntBASIC3.29□□□□□ -1.88
SMSP52788 AC006116.10-201ENST00000591836 581 ntBASIC3.29□□□□□ -1.88
SMSP52788 RNU1-30P-201ENST00000606575 163 ntBASIC3.29□□□□□ -1.88
SMSP52788 AC097478.2-201ENST00000610572 514 ntBASIC3.29□□□□□ -1.88
SMSP52788 MIR7153-201ENST00000637758 57 ntBASIC3.29□□□□□ -1.88
SMSP52788 AC068647.1-201ENST00000489539 2265 ntBASIC3.29□□□□□ -1.88
SMSP52788 AC058791.1-201ENST00000608412 3198 ntBASIC3.29□□□□□ -1.88
SMSP52788 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
SMSP52788 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SMSP52788 AP000776.1-201ENST00000530032 1663 ntBASIC3.29□□□□□ -1.88
SMSP52788 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.29□□□□□ -1.88
SMSP52788 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SMSP52788 AC110774.1-201ENST00000623567 2018 ntBASIC3.29□□□□□ -1.88
SMSP52788 AL022578.1-201ENST00000439330 1433 ntBASIC3.28□□□□□ -1.88
SMSP52788 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.28□□□□□ -1.88
SMSP52788 AC011477.1-204ENST00000623416 1325 ntBASIC3.28□□□□□ -1.88
SMSP52788 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SMSP52788 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SMSP52788 RNU6-343P-201ENST00000364709 104 ntBASIC3.28□□□□□ -1.88
SMSP52788 RNU6-359P-201ENST00000365466 108 ntBASIC3.28□□□□□ -1.88
SMSP52788 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SMSP52788 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.28□□□□□ -1.88
SMSP52788 RNU6-1242P-201ENST00000391052 103 ntBASIC3.28□□□□□ -1.88
SMSP52788 TAF9BP1-201ENST00000396646 746 ntBASIC3.28□□□□□ -1.88
SMSP52788 RPS3AP26-201ENST00000398259 784 ntBASIC3.28□□□□□ -1.88
SMSP52788 U3.39-201ENST00000408569 239 ntBASIC3.28□□□□□ -1.88
SMSP52788 RNU2-43P-201ENST00000410306 190 ntBASIC3.28□□□□□ -1.88
SMSP52788 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.28□□□□□ -1.88
SMSP52788 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.28□□□□□ -1.88
SMSP52788 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.28□□□□□ -1.88
SMSP52788 MTCO2P20-201ENST00000437339 673 ntBASIC3.28□□□□□ -1.88
SMSP52788 RPS29P2-201ENST00000479278 136 ntBASIC3.28□□□□□ -1.88
SMSP52788 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.28□□□□□ -1.88
SMSP52788 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.28□□□□□ -1.88
SMSP52788 RANP9-201ENST00000519957 271 ntBASIC3.28□□□□□ -1.88
SMSP52788 AC103783.1-201ENST00000520506 373 ntBASIC3.28□□□□□ -1.88
SMSP52788 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.28□□□□□ -1.88
SMSP52788 AP006245.1-201ENST00000522549 120 ntBASIC3.28□□□□□ -1.88
SMSP52788 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.28□□□□□ -1.88
SMSP52788 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.28□□□□□ -1.88
SMSP52788 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.28□□□□□ -1.88
SMSP52788 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.28□□□□□ -1.88
SMSP52788 AC006077.1-201ENST00000604746 343 ntBASIC3.28□□□□□ -1.88
SMSP52788 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.28□□□□□ -1.88
SMSP52788 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SMSP52788 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.28□□□□□ -1.88
SMSP52788 MIR3651-201ENST00000630427 90 ntBASIC3.28□□□□□ -1.88
SMSP52788 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.28□□□□□ -1.88
SMSP52788 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SMSP52788 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
SMSP52788 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SMSP52788 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
SMSP52788 AL079305.1-201ENST00000623159 3008 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms