Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
USP11P51784 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
USP11P51784 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
USP11P51784 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.47□□□□□ -1.53
USP11P51784 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.47□□□□□ -1.53
USP11P51784 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
USP11P51784 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
USP11P51784 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.46□□□□□ -1.53
USP11P51784 AC005005.4-201ENST00000623789 16698 ntBASIC5.46□□□□□ -1.53
USP11P51784 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
USP11P51784 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
USP11P51784 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
USP11P51784 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
USP11P51784 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.46□□□□□ -1.54
USP11P51784 RNU6-28P-201ENST00000362378 107 ntBASIC5.46□□□□□ -1.54
USP11P51784 RNU6-1026P-201ENST00000384465 108 ntBASIC5.46□□□□□ -1.54
USP11P51784 Y_RNA.527-201ENST00000384573 102 ntBASIC5.46□□□□□ -1.54
USP11P51784 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
USP11P51784 FABP7P2-201ENST00000429946 379 ntBASIC5.46□□□□□ -1.54
USP11P51784 TIMM9P1-201ENST00000436122 256 ntBASIC5.46□□□□□ -1.54
USP11P51784 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
USP11P51784 SUMO1P3-201ENST00000439961 304 ntBASIC5.46□□□□□ -1.54
USP11P51784 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.46□□□□□ -1.54
USP11P51784 AL354710.1-201ENST00000453641 246 ntBASIC5.46□□□□□ -1.54
USP11P51784 ZFRP1-201ENST00000457579 2970 ntBASIC5.46□□□□□ -1.54
USP11P51784 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.46□□□□□ -1.54
USP11P51784 AC083982.1-201ENST00000485679 344 ntBASIC5.46□□□□□ -1.54
USP11P51784 RNU1-6P-201ENST00000516290 144 ntBASIC5.46□□□□□ -1.54
USP11P51784 AP000857.1-201ENST00000532151 543 ntBASIC5.46□□□□□ -1.54
USP11P51784 AP001880.2-201ENST00000538233 448 ntBASIC5.46□□□□□ -1.54
USP11P51784 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.46□□□□□ -1.54
USP11P51784 AC133555.2-201ENST00000550213 292 ntBASIC5.46□□□□□ -1.54
USP11P51784 IMMP1LP2-201ENST00000552954 492 ntBASIC5.46□□□□□ -1.54
USP11P51784 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.46□□□□□ -1.54
USP11P51784 AC018552.3-201ENST00000567416 561 ntBASIC5.46□□□□□ -1.54
USP11P51784 AC091042.1-201ENST00000579213 173 ntBASIC5.46□□□□□ -1.54
USP11P51784 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.46□□□□□ -1.54
USP11P51784 MIR5690-201ENST00000583739 73 ntBASIC5.46□□□□□ -1.54
USP11P51784 AL512605.2-201ENST00000592972 256 ntBASIC5.46□□□□□ -1.54
USP11P51784 AL592436.1-201ENST00000605135 558 ntBASIC5.46□□□□□ -1.54
USP11P51784 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.46□□□□□ -1.54
USP11P51784 HMGB1P24-202ENST00000615653 685 ntBASIC5.46□□□□□ -1.54
USP11P51784 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.46□□□□□ -1.54
USP11P51784 OR52H1-202ENST00000641796 1061 ntBASIC5.46□□□□□ -1.54
USP11P51784 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
USP11P51784 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
USP11P51784 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
USP11P51784 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.46□□□□□ -1.54
USP11P51784 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.46□□□□□ -1.54
USP11P51784 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.45□□□□□ -1.54
USP11P51784 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
USP11P51784 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
USP11P51784 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
USP11P51784 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
USP11P51784 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
USP11P51784 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
USP11P51784 RNU6-1115P-201ENST00000362490 106 ntBASIC5.45□□□□□ -1.54
USP11P51784 RNU6-1252P-201ENST00000363054 104 ntBASIC5.45□□□□□ -1.54
USP11P51784 RN7SKP103-201ENST00000363848 320 ntBASIC5.45□□□□□ -1.54
USP11P51784 SNORA62.1-201ENST00000364287 154 ntBASIC5.45□□□□□ -1.54
USP11P51784 RNY3P13-201ENST00000365542 102 ntBASIC5.45□□□□□ -1.54
USP11P51784 SET-203ENST00000372688 801 ntTSL 2 BASIC5.45□□□□□ -1.54
USP11P51784 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
USP11P51784 RNU6-1207P-201ENST00000384343 107 ntBASIC5.45□□□□□ -1.54
USP11P51784 MIR558-201ENST00000384920 94 ntBASIC5.45□□□□□ -1.54
USP11P51784 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
USP11P51784 RNU6-847P-201ENST00000411115 108 ntBASIC5.45□□□□□ -1.54
USP11P51784 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.45□□□□□ -1.54
USP11P51784 CHIAP3-201ENST00000423668 1133 ntBASIC5.45□□□□□ -1.54
USP11P51784 AL360081.1-201ENST00000428299 555 ntBASIC5.45□□□□□ -1.54
USP11P51784 AL049745.1-201ENST00000433953 286 ntBASIC5.45□□□□□ -1.54
USP11P51784 AC114495.1-201ENST00000441274 436 ntBASIC5.45□□□□□ -1.54
USP11P51784 AC010733.1-201ENST00000451515 401 ntBASIC5.45□□□□□ -1.54
USP11P51784 MTND1P9-201ENST00000453775 944 ntBASIC5.45□□□□□ -1.54
USP11P51784 AC104308.1-201ENST00000454621 333 ntBASIC5.45□□□□□ -1.54
USP11P51784 AC126389.1-201ENST00000477436 290 ntBASIC5.45□□□□□ -1.54
USP11P51784 AC020893.1-201ENST00000502452 580 ntBASIC5.45□□□□□ -1.54
USP11P51784 RNU6-976P-201ENST00000516086 111 ntBASIC5.45□□□□□ -1.54
USP11P51784 RNA5SP249-201ENST00000516127 99 ntBASIC5.45□□□□□ -1.54
USP11P51784 RN7SKP276-201ENST00000516242 268 ntBASIC5.45□□□□□ -1.54
USP11P51784 RNA5SP454-201ENST00000517231 127 ntBASIC5.45□□□□□ -1.54
USP11P51784 HMGB1P19-201ENST00000517578 577 ntBASIC5.45□□□□□ -1.54
USP11P51784 OR4P1P-201ENST00000530808 1136 ntBASIC5.45□□□□□ -1.54
USP11P51784 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.45□□□□□ -1.54
USP11P51784 MYL12BP1-201ENST00000569826 507 ntBASIC5.45□□□□□ -1.54
USP11P51784 MIR4790-201ENST00000577799 79 ntBASIC5.45□□□□□ -1.54
USP11P51784 AC068790.3-201ENST00000602988 553 ntBASIC5.45□□□□□ -1.54
USP11P51784 AL008729.2-201ENST00000606393 473 ntBASIC5.45□□□□□ -1.54
USP11P51784 AL365434.2-201ENST00000607979 234 ntBASIC5.45□□□□□ -1.54
USP11P51784 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.45□□□□□ -1.54
USP11P51784 AC007485.1-201ENST00000616755 206 ntBASIC5.45□□□□□ -1.54
USP11P51784 uc_338.11-201ENST00000619132 160 ntBASIC5.45□□□□□ -1.54
USP11P51784 AL159972.1-201ENST00000625150 448 ntBASIC5.45□□□□□ -1.54
USP11P51784 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USP11P51784 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.45□□□□□ -1.54
USP11P51784 ZNF807-201ENST00000328088 1707 ntBASIC5.45□□□□□ -1.54
USP11P51784 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
USP11P51784 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USP11P51784 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.45□□□□□ -1.54
USP11P51784 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms