Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 THAP5P1-201ENST00000439089 262 ntBASIC4.38□□□□□ -1.71
TM4SF4P48230 RANP8-201ENST00000444720 713 ntBASIC4.38□□□□□ -1.71
TM4SF4P48230 RPS17P13-201ENST00000448974 407 ntBASIC4.38□□□□□ -1.71
TM4SF4P48230 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.38□□□□□ -1.71
TM4SF4P48230 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TM4SF4P48230 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.38□□□□□ -1.71
TM4SF4P48230 AC010424.1-201ENST00000506336 297 ntBASIC4.38□□□□□ -1.71
TM4SF4P48230 RNU2-58P-201ENST00000516403 183 ntBASIC4.38□□□□□ -1.71
TM4SF4P48230 RNU6-1003P-201ENST00000517099 105 ntBASIC4.38□□□□□ -1.71
TM4SF4P48230 RNU6-1073P-201ENST00000517182 106 ntBASIC4.38□□□□□ -1.71
TM4SF4P48230 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.38□□□□□ -1.71
TM4SF4P48230 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.38□□□□□ -1.71
TM4SF4P48230 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.38□□□□□ -1.71
TM4SF4P48230 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TM4SF4P48230 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.38□□□□□ -1.71
TM4SF4P48230 BNIP3P8-201ENST00000597863 560 ntBASIC4.38□□□□□ -1.71
TM4SF4P48230 AP001981.2-201ENST00000603241 418 ntBASIC4.38□□□□□ -1.71
TM4SF4P48230 AC011468.4-201ENST00000603942 409 ntBASIC4.38□□□□□ -1.71
TM4SF4P48230 AL137843.1-201ENST00000605078 385 ntBASIC4.38□□□□□ -1.71
TM4SF4P48230 AC239868.4-201ENST00000608318 671 ntBASIC4.38□□□□□ -1.71
TM4SF4P48230 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.38□□□□□ -1.71
TM4SF4P48230 AC005086.4-201ENST00000623065 213 ntBASIC4.38□□□□□ -1.71
TM4SF4P48230 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
TM4SF4P48230 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TM4SF4P48230 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TM4SF4P48230 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TM4SF4P48230 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TM4SF4P48230 THAP12P5-201ENST00000405864 2275 ntBASIC4.38□□□□□ -1.71
TM4SF4P48230 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TM4SF4P48230 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TM4SF4P48230 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.37□□□□□ -1.71
TM4SF4P48230 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TM4SF4P48230 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TM4SF4P48230 AL731532.2-201ENST00000623542 1953 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 RNU1-15P-201ENST00000353977 144 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TM4SF4P48230 SNORA48.5-201ENST00000391143 135 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 FCF1P10-201ENST00000407590 479 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 RNU2-43P-201ENST00000410306 190 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 RN7SKP56-201ENST00000410513 331 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.37□□□□□ -1.71
TM4SF4P48230 HMGN1P24-201ENST00000412282 298 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.37□□□□□ -1.71
TM4SF4P48230 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.37□□□□□ -1.71
TM4SF4P48230 BX842559.1-201ENST00000419615 532 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 RPL21P32-201ENST00000419877 477 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.37□□□□□ -1.71
TM4SF4P48230 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.37□□□□□ -1.71
TM4SF4P48230 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.37□□□□□ -1.71
TM4SF4P48230 NPM1P49-201ENST00000448027 714 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 MTND1P27-201ENST00000451117 902 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 snoU13.4-201ENST00000458916 104 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 RPL21P10-201ENST00000463521 490 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 RPL21P104-201ENST00000464143 478 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.37□□□□□ -1.71
TM4SF4P48230 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.37□□□□□ -1.71
TM4SF4P48230 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.37□□□□□ -1.71
TM4SF4P48230 AP003497.1-201ENST00000528472 562 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 AC103843.2-201ENST00000530523 682 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 AC135279.1-201ENST00000543493 504 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.37□□□□□ -1.71
TM4SF4P48230 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.37□□□□□ -1.71
TM4SF4P48230 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.37□□□□□ -1.71
TM4SF4P48230 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.37□□□□□ -1.71
TM4SF4P48230 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.37□□□□□ -1.71
TM4SF4P48230 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.37□□□□□ -1.71
TM4SF4P48230 OR4K8P-201ENST00000578842 1048 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 MIR548AB-201ENST00000584917 84 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 AC012493.2-201ENST00000595083 291 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 AC006077.1-201ENST00000604746 343 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 AC121334.2-201ENST00000605387 271 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 AC245008.1-201ENST00000608123 476 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.37□□□□□ -1.71
TM4SF4P48230 AC090582.1-201ENST00000636321 199 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 AC010149.2-201ENST00000637608 315 ntBASIC4.37□□□□□ -1.71
TM4SF4P48230 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.37□□□□□ -1.71
TM4SF4P48230 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
TM4SF4P48230 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TM4SF4P48230 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TM4SF4P48230 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TM4SF4P48230 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TM4SF4P48230 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TM4SF4P48230 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TM4SF4P48230 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TM4SF4P48230 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.36□□□□□ -1.71
TM4SF4P48230 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.36□□□□□ -1.71
TM4SF4P48230 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TM4SF4P48230 MARK2P15-201ENST00000432204 2186 ntBASIC4.36□□□□□ -1.71
TM4SF4P48230 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TM4SF4P48230 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.36□□□□□ -1.71
TM4SF4P48230 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TM4SF4P48230 GNG5P1-201ENST00000255500 204 ntBASIC4.36□□□□□ -1.71
TM4SF4P48230 RNU6-600P-201ENST00000362524 99 ntBASIC4.36□□□□□ -1.71
TM4SF4P48230 RNU6-629P-201ENST00000384061 103 ntBASIC4.36□□□□□ -1.71
TM4SF4P48230 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TM4SF4P48230 MTND1P21-201ENST00000412991 285 ntBASIC4.36□□□□□ -1.71
TM4SF4P48230 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.36□□□□□ -1.71
TM4SF4P48230 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.36□□□□□ -1.71
TM4SF4P48230 AC233728.2-201ENST00000425348 757 ntBASIC4.36□□□□□ -1.71
TM4SF4P48230 AL356583.2-201ENST00000426536 280 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms