Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 PRELID3BP8-201ENST00000604148 295 ntBASIC3.2□□□□□ -1.9
CDX1P47902 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.2□□□□□ -1.9
CDX1P47902 AL360219.1-201ENST00000610230 366 ntBASIC3.2□□□□□ -1.9
CDX1P47902 AL390240.1-201ENST00000612950 384 ntBASIC3.2□□□□□ -1.9
CDX1P47902 AP000676.3-201ENST00000623299 569 ntBASIC3.2□□□□□ -1.9
CDX1P47902 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.2□□□□□ -1.9
CDX1P47902 AC091965.5-201ENST00000624785 342 ntBASIC3.2□□□□□ -1.9
CDX1P47902 AC019226.1-201ENST00000625666 515 ntBASIC3.2□□□□□ -1.9
CDX1P47902 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDX1P47902 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CDX1P47902 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.2□□□□□ -1.9
CDX1P47902 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CDX1P47902 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.2□□□□□ -1.9
CDX1P47902 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDX1P47902 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CDX1P47902 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.19□□□□□ -1.9
CDX1P47902 CEP170P1-201ENST00000502249 4587 ntBASIC3.19□□□□□ -1.9
CDX1P47902 DDX10P1-201ENST00000448545 1933 ntBASIC3.19□□□□□ -1.9
CDX1P47902 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDX1P47902 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CDX1P47902 RNU6-432P-201ENST00000384196 109 ntBASIC3.19□□□□□ -1.9
CDX1P47902 RNU5A-2P-201ENST00000384337 116 ntBASIC3.19□□□□□ -1.9
CDX1P47902 AF228730.1-201ENST00000397972 663 ntBASIC3.19□□□□□ -1.9
CDX1P47902 HMGN1P24-201ENST00000412282 298 ntBASIC3.19□□□□□ -1.9
CDX1P47902 AC109780.2-201ENST00000413467 845 ntBASIC3.19□□□□□ -1.9
CDX1P47902 PPP1R11P2-201ENST00000423543 382 ntBASIC3.19□□□□□ -1.9
CDX1P47902 OR8F1P-201ENST00000425243 930 ntBASIC3.19□□□□□ -1.9
CDX1P47902 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.19□□□□□ -1.9
CDX1P47902 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.19□□□□□ -1.9
CDX1P47902 RPS6P15-201ENST00000431996 751 ntBASIC3.19□□□□□ -1.9
CDX1P47902 RPL7P34-201ENST00000433316 712 ntBASIC3.19□□□□□ -1.9
CDX1P47902 RPL35AP22-201ENST00000436855 335 ntBASIC3.19□□□□□ -1.9
CDX1P47902 AC006011.1-201ENST00000442758 349 ntBASIC3.19□□□□□ -1.9
CDX1P47902 ART2BP-201ENST00000453501 499 ntBASIC3.19□□□□□ -1.9
CDX1P47902 BZW1P2-201ENST00000473537 826 ntBASIC3.19□□□□□ -1.9
CDX1P47902 RN7SL132P-201ENST00000478131 296 ntBASIC3.19□□□□□ -1.9
CDX1P47902 AC068587.2-201ENST00000478386 781 ntBASIC3.19□□□□□ -1.9
CDX1P47902 RPL31P60-201ENST00000478450 367 ntBASIC3.19□□□□□ -1.9
CDX1P47902 RPL29P14-201ENST00000495837 428 ntBASIC3.19□□□□□ -1.9
CDX1P47902 OR2A20P-203ENST00000498397 1268 ntBASIC3.19□□□□□ -1.9
CDX1P47902 AC109464.2-201ENST00000510242 943 ntBASIC3.19□□□□□ -1.9
CDX1P47902 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.19□□□□□ -1.9
CDX1P47902 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.19□□□□□ -1.9
CDX1P47902 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.19□□□□□ -1.9
CDX1P47902 GNRHR2P1-201ENST00000555315 631 ntBASIC3.19□□□□□ -1.9
CDX1P47902 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.19□□□□□ -1.9
CDX1P47902 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.19□□□□□ -1.9
CDX1P47902 AL845331.3-202ENST00000562856 261 ntBASIC3.19□□□□□ -1.9
CDX1P47902 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.19□□□□□ -1.9
CDX1P47902 MIR3921-201ENST00000577308 85 ntBASIC3.19□□□□□ -1.9
CDX1P47902 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDX1P47902 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.19□□□□□ -1.9
CDX1P47902 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.19□□□□□ -1.9
CDX1P47902 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.19□□□□□ -1.9
CDX1P47902 MTCYBP22-201ENST00000603788 447 ntBASIC3.19□□□□□ -1.9
CDX1P47902 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDX1P47902 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.19□□□□□ -1.9
CDX1P47902 AC091965.4-201ENST00000607691 587 ntBASIC3.19□□□□□ -1.9
CDX1P47902 AC004223.4-201ENST00000612426 332 ntBASIC3.19□□□□□ -1.9
CDX1P47902 AC122133.1-201ENST00000613964 233 ntBASIC3.19□□□□□ -1.9
CDX1P47902 MIR7151-201ENST00000617477 60 ntBASIC3.19□□□□□ -1.9
CDX1P47902 AL356266.1-201ENST00000623311 483 ntBASIC3.19□□□□□ -1.9
CDX1P47902 MIR4275-201ENST00000636486 87 ntBASIC3.19□□□□□ -1.9
CDX1P47902 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDX1P47902 RLIMP1-201ENST00000339626 1680 ntBASIC3.19□□□□□ -1.9
CDX1P47902 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDX1P47902 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CDX1P47902 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CDX1P47902 CR383658.2-201ENST00000547576 1525 ntBASIC3.19□□□□□ -1.9
CDX1P47902 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDX1P47902 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDX1P47902 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDX1P47902 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CDX1P47902 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CDX1P47902 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.18□□□□□ -1.9
CDX1P47902 AC002546.1-201ENST00000588041 2504 ntBASIC3.18□□□□□ -1.9
CDX1P47902 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDX1P47902 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDX1P47902 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
CDX1P47902 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDX1P47902 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CDX1P47902 RNU5E-8P-201ENST00000363502 116 ntBASIC3.18□□□□□ -1.9
CDX1P47902 Y_RNA.560-201ENST00000384689 102 ntBASIC3.18□□□□□ -1.9
CDX1P47902 MTHFD2P2-201ENST00000407725 247 ntBASIC3.18□□□□□ -1.9
CDX1P47902 U3.42-201ENST00000408746 214 ntBASIC3.18□□□□□ -1.9
CDX1P47902 RNU4-72P-201ENST00000410754 173 ntBASIC3.18□□□□□ -1.9
CDX1P47902 AC007390.1-201ENST00000415722 356 ntBASIC3.18□□□□□ -1.9
CDX1P47902 HSFY4P-201ENST00000415994 1181 ntBASIC3.18□□□□□ -1.9
CDX1P47902 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.18□□□□□ -1.9
CDX1P47902 RPL17P36-201ENST00000420302 549 ntBASIC3.18□□□□□ -1.9
CDX1P47902 AC092447.3-201ENST00000426027 686 ntBASIC3.18□□□□□ -1.9
CDX1P47902 AL117339.2-201ENST00000430475 180 ntBASIC3.18□□□□□ -1.9
CDX1P47902 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.18□□□□□ -1.9
CDX1P47902 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.18□□□□□ -1.9
CDX1P47902 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.18□□□□□ -1.9
CDX1P47902 RPL21P89-201ENST00000444021 467 ntBASIC3.18□□□□□ -1.9
CDX1P47902 RPS29P31-201ENST00000446147 164 ntBASIC3.18□□□□□ -1.9
CDX1P47902 MTND2P24-201ENST00000453434 806 ntBASIC3.18□□□□□ -1.9
CDX1P47902 AL049714.1-201ENST00000466686 347 ntBASIC3.18□□□□□ -1.9
CDX1P47902 AP002884.2-201ENST00000471647 395 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms