Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.03□□□□□ -1.6
CCNFP41002 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.03□□□□□ -1.6
CCNFP41002 AC093838.1-201ENST00000613014 469 ntBASIC5.03□□□□□ -1.6
CCNFP41002 U73479.1-201ENST00000618062 168 ntBASIC5.03□□□□□ -1.6
CCNFP41002 AL161637.1-201ENST00000622380 412 ntBASIC5.03□□□□□ -1.6
CCNFP41002 AL359757.2-201ENST00000624309 274 ntBASIC5.03□□□□□ -1.6
CCNFP41002 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCNFP41002 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCNFP41002 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCNFP41002 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.03□□□□□ -1.6
CCNFP41002 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCNFP41002 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.03□□□□□ -1.6
CCNFP41002 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCNFP41002 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCNFP41002 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCNFP41002 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.03□□□□□ -1.6
CCNFP41002 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CCNFP41002 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCNFP41002 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.02□□□□□ -1.61
CCNFP41002 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCNFP41002 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCNFP41002 LINC01355-201ENST00000566551 5444 ntBASIC5.02□□□□□ -1.61
CCNFP41002 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCNFP41002 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCNFP41002 RNU6-61P-201ENST00000365528 109 ntBASIC5.02□□□□□ -1.61
CCNFP41002 MIR105-2-201ENST00000385083 81 ntBASIC5.02□□□□□ -1.61
CCNFP41002 MIR559-201ENST00000385188 96 ntBASIC5.02□□□□□ -1.61
CCNFP41002 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCNFP41002 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCNFP41002 AL109755.1-201ENST00000401791 649 ntBASIC5.02□□□□□ -1.61
CCNFP41002 MIR548F5-201ENST00000408421 86 ntBASIC5.02□□□□□ -1.61
CCNFP41002 SNORA77-201ENST00000408716 125 ntBASIC5.02□□□□□ -1.61
CCNFP41002 DDX39BP1-205ENST00000422507 192 ntBASIC5.02□□□□□ -1.61
CCNFP41002 RPL23AP38-201ENST00000423801 469 ntBASIC5.02□□□□□ -1.61
CCNFP41002 RPS29P9-201ENST00000440360 171 ntBASIC5.02□□□□□ -1.61
CCNFP41002 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.02□□□□□ -1.61
CCNFP41002 RNU6-1208P-201ENST00000459588 107 ntBASIC5.02□□□□□ -1.61
CCNFP41002 MTCO1P29-201ENST00000496868 288 ntBASIC5.02□□□□□ -1.61
CCNFP41002 RPL23AP55-201ENST00000498163 452 ntBASIC5.02□□□□□ -1.61
CCNFP41002 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
CCNFP41002 AC108078.2-201ENST00000510750 236 ntBASIC5.02□□□□□ -1.61
CCNFP41002 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.02□□□□□ -1.61
CCNFP41002 RNU6-864P-201ENST00000516256 108 ntBASIC5.02□□□□□ -1.61
CCNFP41002 RNU6-1092P-201ENST00000516955 87 ntBASIC5.02□□□□□ -1.61
CCNFP41002 SNORA25.17-201ENST00000517184 124 ntBASIC5.02□□□□□ -1.61
CCNFP41002 AP001922.4-201ENST00000526967 290 ntBASIC5.02□□□□□ -1.61
CCNFP41002 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.02□□□□□ -1.61
CCNFP41002 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.02□□□□□ -1.61
CCNFP41002 AC024619.4-201ENST00000580924 316 ntBASIC5.02□□□□□ -1.61
CCNFP41002 AC011447.4-201ENST00000587562 111 ntBASIC5.02□□□□□ -1.61
CCNFP41002 RNF138P2-201ENST00000603490 592 ntBASIC5.02□□□□□ -1.61
CCNFP41002 AL592436.1-201ENST00000605135 558 ntBASIC5.02□□□□□ -1.61
CCNFP41002 AC012443.1-201ENST00000605605 231 ntBASIC5.02□□□□□ -1.61
CCNFP41002 uc_338.11-201ENST00000619132 160 ntBASIC5.02□□□□□ -1.61
CCNFP41002 AL589994.2-201ENST00000621124 579 ntBASIC5.02□□□□□ -1.61
CCNFP41002 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.02□□□□□ -1.61
CCNFP41002 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.02□□□□□ -1.61
CCNFP41002 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.02□□□□□ -1.61
CCNFP41002 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCNFP41002 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCNFP41002 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCNFP41002 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCNFP41002 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.02□□□□□ -1.61
CCNFP41002 DDX18P3-201ENST00000404856 2007 ntBASIC5.02□□□□□ -1.61
CCNFP41002 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.02□□□□□ -1.61
CCNFP41002 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CCNFP41002 LINC01109-201ENST00000603837 3081 ntBASIC5.02□□□□□ -1.61
CCNFP41002 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.02□□□□□ -1.61
CCNFP41002 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCNFP41002 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.02□□□□□ -1.61
CCNFP41002 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.02□□□□□ -1.61
CCNFP41002 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCNFP41002 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CCNFP41002 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCNFP41002 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.01□□□□□ -1.61
CCNFP41002 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNFP41002 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CCNFP41002 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNFP41002 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCNFP41002 Y_RNA.216-201ENST00000364205 93 ntBASIC5.01□□□□□ -1.61
CCNFP41002 RNU6-356P-201ENST00000384140 107 ntBASIC5.01□□□□□ -1.61
CCNFP41002 AP000580.1-201ENST00000404439 358 ntBASIC5.01□□□□□ -1.61
CCNFP41002 RNU4-14P-201ENST00000410858 122 ntBASIC5.01□□□□□ -1.61
CCNFP41002 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.01□□□□□ -1.61
CCNFP41002 BX510359.3-201ENST00000422168 306 ntBASIC5.01□□□□□ -1.61
CCNFP41002 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.01□□□□□ -1.61
CCNFP41002 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.01□□□□□ -1.61
CCNFP41002 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.01□□□□□ -1.61
CCNFP41002 AC005019.1-201ENST00000436455 431 ntBASIC5.01□□□□□ -1.61
CCNFP41002 GTF2IP13-201ENST00000438487 386 ntBASIC5.01□□□□□ -1.61
CCNFP41002 AC107399.1-201ENST00000451226 265 ntBASIC5.01□□□□□ -1.61
CCNFP41002 CYCSP34-201ENST00000458172 304 ntBASIC5.01□□□□□ -1.61
CCNFP41002 RN7SL443P-201ENST00000464331 290 ntBASIC5.01□□□□□ -1.61
CCNFP41002 HMGB1P25-201ENST00000468402 607 ntBASIC5.01□□□□□ -1.61
CCNFP41002 RN7SL222P-201ENST00000476452 299 ntBASIC5.01□□□□□ -1.61
CCNFP41002 AC068587.1-201ENST00000483613 781 ntBASIC5.01□□□□□ -1.61
CCNFP41002 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCNFP41002 CCDC34P1-201ENST00000507441 517 ntBASIC5.01□□□□□ -1.61
CCNFP41002 TRMT10BP1-201ENST00000519377 943 ntBASIC5.01□□□□□ -1.61
CCNFP41002 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms