Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RFC4P35249 AL136520.1-201ENST00000600311 1322 ntBASIC3.38□□□□□ -1.87
RFC4P35249 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RFC4P35249 RNU6-1151P-201ENST00000384684 107 ntBASIC3.37□□□□□ -1.87
RFC4P35249 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RFC4P35249 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RFC4P35249 AP002784.2-201ENST00000397300 549 ntBASIC3.37□□□□□ -1.87
RFC4P35249 RNU6-1077P-201ENST00000410506 102 ntBASIC3.37□□□□□ -1.87
RFC4P35249 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.37□□□□□ -1.87
RFC4P35249 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.37□□□□□ -1.87
RFC4P35249 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.37□□□□□ -1.87
RFC4P35249 Z98742.3-201ENST00000418637 326 ntBASIC3.37□□□□□ -1.87
RFC4P35249 PAICSP7-201ENST00000419829 962 ntBASIC3.37□□□□□ -1.87
RFC4P35249 TOMM20P4-201ENST00000427861 435 ntBASIC3.37□□□□□ -1.87
RFC4P35249 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.37□□□□□ -1.87
RFC4P35249 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.37□□□□□ -1.87
RFC4P35249 HSFY3P-201ENST00000444242 1191 ntBASIC3.37□□□□□ -1.87
RFC4P35249 AL445669.2-201ENST00000454425 421 ntBASIC3.37□□□□□ -1.87
RFC4P35249 GTF2IP12-201ENST00000456547 356 ntBASIC3.37□□□□□ -1.87
RFC4P35249 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.37□□□□□ -1.87
RFC4P35249 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.37□□□□□ -1.87
RFC4P35249 AC091179.1-201ENST00000461606 579 ntBASIC3.37□□□□□ -1.87
RFC4P35249 AC008379.1-201ENST00000463655 464 ntBASIC3.37□□□□□ -1.87
RFC4P35249 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RFC4P35249 RPS29P21-201ENST00000496272 170 ntBASIC3.37□□□□□ -1.87
RFC4P35249 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.37□□□□□ -1.87
RFC4P35249 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.37□□□□□ -1.87
RFC4P35249 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RFC4P35249 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RFC4P35249 AC011611.5-201ENST00000552477 578 ntBASIC3.37□□□□□ -1.87
RFC4P35249 BDH2P1-201ENST00000602288 736 ntBASIC3.37□□□□□ -1.87
RFC4P35249 AC090115.4-201ENST00000609970 188 ntBASIC3.37□□□□□ -1.87
RFC4P35249 AC084824.5-201ENST00000612009 413 ntBASIC3.37□□□□□ -1.87
RFC4P35249 AC002076.2-201ENST00000617362 122 ntBASIC3.37□□□□□ -1.87
RFC4P35249 AL355493.4-201ENST00000618530 292 ntBASIC3.37□□□□□ -1.87
RFC4P35249 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RFC4P35249 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RFC4P35249 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RFC4P35249 RNA5SP289-201ENST00000362332 137 ntBASIC3.36□□□□□ -1.87
RFC4P35249 RNA5SP258-201ENST00000362750 119 ntBASIC3.36□□□□□ -1.87
RFC4P35249 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RFC4P35249 RNU6-339P-201ENST00000384310 107 ntBASIC3.36□□□□□ -1.87
RFC4P35249 CYCSP45-201ENST00000402289 315 ntBASIC3.36□□□□□ -1.87
RFC4P35249 RNU6-77P-201ENST00000410554 91 ntBASIC3.36□□□□□ -1.87
RFC4P35249 AC003685.2-201ENST00000422795 395 ntBASIC3.36□□□□□ -1.87
RFC4P35249 AC233981.1-201ENST00000423224 461 ntBASIC3.36□□□□□ -1.87
RFC4P35249 UBE2V1P6-201ENST00000430840 422 ntBASIC3.36□□□□□ -1.87
RFC4P35249 AC010881.1-201ENST00000433830 235 ntBASIC3.36□□□□□ -1.87
RFC4P35249 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.36□□□□□ -1.87
RFC4P35249 AL096829.2-201ENST00000446582 742 ntBASIC3.36□□□□□ -1.87
RFC4P35249 WASF1P1-201ENST00000447560 1131 ntBASIC3.36□□□□□ -1.87
RFC4P35249 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.36□□□□□ -1.87
RFC4P35249 HMGN3P1-201ENST00000453847 193 ntBASIC3.36□□□□□ -1.87
RFC4P35249 GAPDHP39-201ENST00000481866 979 ntBASIC3.36□□□□□ -1.87
RFC4P35249 OR5H5P-201ENST00000503164 928 ntBASIC3.36□□□□□ -1.87
RFC4P35249 AC021146.5-201ENST00000503544 545 ntBASIC3.36□□□□□ -1.87
RFC4P35249 RN7SKP43-201ENST00000516173 320 ntBASIC3.36□□□□□ -1.87
RFC4P35249 RNU6-416P-201ENST00000516265 103 ntBASIC3.36□□□□□ -1.87
RFC4P35249 AC022690.1-201ENST00000526681 550 ntBASIC3.36□□□□□ -1.87
RFC4P35249 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RFC4P35249 MIR4789-201ENST00000577469 82 ntBASIC3.36□□□□□ -1.87
RFC4P35249 AC025588.3-201ENST00000604182 274 ntBASIC3.36□□□□□ -1.87
RFC4P35249 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.36□□□□□ -1.87
RFC4P35249 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.36□□□□□ -1.87
RFC4P35249 AC095031.1-201ENST00000623685 672 ntBASIC3.36□□□□□ -1.87
RFC4P35249 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RFC4P35249 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.36□□□□□ -1.87
RFC4P35249 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.35□□□□□ -1.87
RFC4P35249 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.35□□□□□ -1.87
RFC4P35249 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RFC4P35249 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.35□□□□□ -1.87
RFC4P35249 SNORD62.1-201ENST00000362541 86 ntBASIC3.35□□□□□ -1.87
RFC4P35249 RNU6-354P-201ENST00000383862 107 ntBASIC3.35□□□□□ -1.87
RFC4P35249 RNU6-610P-201ENST00000384264 107 ntBASIC3.35□□□□□ -1.87
RFC4P35249 RPL22P22-201ENST00000395439 379 ntBASIC3.35□□□□□ -1.87
RFC4P35249 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
RFC4P35249 RN7SKP192-201ENST00000411291 327 ntBASIC3.35□□□□□ -1.87
RFC4P35249 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.35□□□□□ -1.87
RFC4P35249 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.35□□□□□ -1.87
RFC4P35249 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.35□□□□□ -1.87
RFC4P35249 AC233728.2-201ENST00000425348 757 ntBASIC3.35□□□□□ -1.87
RFC4P35249 AL512637.2-201ENST00000431287 1256 ntBASIC3.35□□□□□ -1.87
RFC4P35249 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.35□□□□□ -1.87
RFC4P35249 RABEPKP1-201ENST00000440529 1026 ntBASIC3.35□□□□□ -1.87
RFC4P35249 UQCRHP3-201ENST00000451503 251 ntBASIC3.35□□□□□ -1.87
RFC4P35249 BX248409.1-201ENST00000455497 255 ntBASIC3.35□□□□□ -1.87
RFC4P35249 AC003982.1-202ENST00000469928 248 ntBASIC3.35□□□□□ -1.87
RFC4P35249 AC092185.1-201ENST00000491371 97 ntBASIC3.35□□□□□ -1.87
RFC4P35249 AC093278.1-201ENST00000494700 600 ntBASIC3.35□□□□□ -1.87
RFC4P35249 AC008837.1-201ENST00000511513 412 ntBASIC3.35□□□□□ -1.87
RFC4P35249 RNA5SP282-201ENST00000516355 108 ntBASIC3.35□□□□□ -1.87
RFC4P35249 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.35□□□□□ -1.87
RFC4P35249 AC068657.1-201ENST00000520807 306 ntBASIC3.35□□□□□ -1.87
RFC4P35249 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.35□□□□□ -1.87
RFC4P35249 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
RFC4P35249 AC004217.3-201ENST00000551552 878 ntBASIC3.35□□□□□ -1.87
RFC4P35249 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.35□□□□□ -1.87
RFC4P35249 AL158827.2-201ENST00000602494 330 ntBASIC3.35□□□□□ -1.87
RFC4P35249 AC098826.3-201ENST00000603823 466 ntBASIC3.35□□□□□ -1.87
RFC4P35249 AC007621.1-201ENST00000604544 437 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms