Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AL049874.1-201ENST00000489560 388 ntBASIC3.9□□□□□ -1.79
BDNFP23560 AC093281.2-201ENST00000510153 597 ntBASIC3.9□□□□□ -1.79
BDNFP23560 RN7SKP18-201ENST00000516005 275 ntBASIC3.9□□□□□ -1.79
BDNFP23560 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.9□□□□□ -1.79
BDNFP23560 CASP1P1-201ENST00000526345 212 ntBASIC3.9□□□□□ -1.79
BDNFP23560 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.9□□□□□ -1.79
BDNFP23560 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.9□□□□□ -1.79
BDNFP23560 MTND1P8-201ENST00000571424 950 ntBASIC3.9□□□□□ -1.79
BDNFP23560 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.9□□□□□ -1.79
BDNFP23560 AL391001.1-201ENST00000602747 715 ntBASIC3.9□□□□□ -1.79
BDNFP23560 NUTF2P8-201ENST00000604593 363 ntBASIC3.9□□□□□ -1.79
BDNFP23560 AC112220.3-201ENST00000605502 502 ntBASIC3.9□□□□□ -1.79
BDNFP23560 AL136370.1-201ENST00000608166 691 ntBASIC3.9□□□□□ -1.79
BDNFP23560 AC004852.3-201ENST00000614131 326 ntBASIC3.9□□□□□ -1.79
BDNFP23560 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.9□□□□□ -1.79
BDNFP23560 AC022960.3-201ENST00000619794 441 ntBASIC3.9□□□□□ -1.79
BDNFP23560 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.9□□□□□ -1.79
BDNFP23560 AP000776.1-201ENST00000530032 1663 ntBASIC3.9□□□□□ -1.79
BDNFP23560 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
BDNFP23560 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.9□□□□□ -1.79
BDNFP23560 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
BDNFP23560 AC099654.7-201ENST00000635788 2127 ntBASIC3.89□□□□□ -1.79
BDNFP23560 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.89□□□□□ -1.79
BDNFP23560 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
BDNFP23560 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.89□□□□□ -1.79
BDNFP23560 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.89□□□□□ -1.79
BDNFP23560 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
BDNFP23560 RNU6-343P-201ENST00000364709 104 ntBASIC3.89□□□□□ -1.79
BDNFP23560 RNU6-744P-201ENST00000365557 107 ntBASIC3.89□□□□□ -1.79
BDNFP23560 RNU6-1316P-201ENST00000384242 108 ntBASIC3.89□□□□□ -1.79
BDNFP23560 MIR449B-201ENST00000384995 97 ntBASIC3.89□□□□□ -1.79
BDNFP23560 ATP5F1P4-201ENST00000397288 746 ntBASIC3.89□□□□□ -1.79
BDNFP23560 ATP5A1P2-201ENST00000412323 255 ntBASIC3.89□□□□□ -1.79
BDNFP23560 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.89□□□□□ -1.79
BDNFP23560 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.89□□□□□ -1.79
BDNFP23560 ATG3P1-201ENST00000419507 911 ntBASIC3.89□□□□□ -1.79
BDNFP23560 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.89□□□□□ -1.79
BDNFP23560 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.89□□□□□ -1.79
BDNFP23560 ATP5HP2-201ENST00000433885 485 ntBASIC3.89□□□□□ -1.79
BDNFP23560 AF228730.2-201ENST00000438784 848 ntBASIC3.89□□□□□ -1.79
BDNFP23560 SNRPGP6-201ENST00000451124 220 ntBASIC3.89□□□□□ -1.79
BDNFP23560 AC034236.1-201ENST00000469891 373 ntBASIC3.89□□□□□ -1.79
BDNFP23560 RPL7P5-201ENST00000471472 736 ntBASIC3.89□□□□□ -1.79
BDNFP23560 RN7SKP157-201ENST00000516174 282 ntBASIC3.89□□□□□ -1.79
BDNFP23560 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.89□□□□□ -1.79
BDNFP23560 OR5AP1P-201ENST00000529730 940 ntBASIC3.89□□□□□ -1.79
BDNFP23560 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.89□□□□□ -1.79
BDNFP23560 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.89□□□□□ -1.79
BDNFP23560 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.89□□□□□ -1.79
BDNFP23560 AL355836.1-201ENST00000555951 870 ntBASIC3.89□□□□□ -1.79
BDNFP23560 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.89□□□□□ -1.79
BDNFP23560 AC074050.1-201ENST00000563247 211 ntBASIC3.89□□□□□ -1.79
BDNFP23560 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.89□□□□□ -1.79
BDNFP23560 AC005951.1-201ENST00000576706 485 ntBASIC3.89□□□□□ -1.79
BDNFP23560 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.89□□□□□ -1.79
BDNFP23560 BRDTP1-201ENST00000605735 677 ntBASIC3.89□□□□□ -1.79
BDNFP23560 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.89□□□□□ -1.79
BDNFP23560 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.89□□□□□ -1.79
BDNFP23560 AL161629.2-201ENST00000615347 275 ntBASIC3.89□□□□□ -1.79
BDNFP23560 AC091905.1-201ENST00000624400 311 ntBASIC3.89□□□□□ -1.79
BDNFP23560 AC009039.2-201ENST00000624524 529 ntBASIC3.89□□□□□ -1.79
BDNFP23560 AP000553.6-201ENST00000641242 118 ntBASIC3.89□□□□□ -1.79
BDNFP23560 AC009093.8-201ENST00000641769 292 ntBASIC3.89□□□□□ -1.79
BDNFP23560 OR5H6-203ENST00000642105 978 ntBASIC3.89□□□□□ -1.79
BDNFP23560 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
BDNFP23560 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.89□□□□□ -1.79
BDNFP23560 RPS4XP5-202ENST00000449995 1334 ntBASIC3.89□□□□□ -1.79
BDNFP23560 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.88□□□□□ -1.79
BDNFP23560 SNORA36C-201ENST00000384289 132 ntBASIC3.88□□□□□ -1.79
BDNFP23560 RNU1-89P-201ENST00000384592 164 ntBASIC3.88□□□□□ -1.79
BDNFP23560 U3.20-201ENST00000390909 217 ntBASIC3.88□□□□□ -1.79
BDNFP23560 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.88□□□□□ -1.79
BDNFP23560 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.88□□□□□ -1.79
BDNFP23560 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.88□□□□□ -1.79
BDNFP23560 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.88□□□□□ -1.79
BDNFP23560 HSPD1P21-201ENST00000436541 245 ntBASIC3.88□□□□□ -1.79
BDNFP23560 AC004854.1-201ENST00000440356 349 ntBASIC3.88□□□□□ -1.79
BDNFP23560 AL358232.1-201ENST00000448030 501 ntBASIC3.88□□□□□ -1.79
BDNFP23560 AC093392.2-201ENST00000450682 337 ntBASIC3.88□□□□□ -1.79
BDNFP23560 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.88□□□□□ -1.79
BDNFP23560 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.88□□□□□ -1.79
BDNFP23560 AC106707.2-201ENST00000484182 374 ntBASIC3.88□□□□□ -1.79
BDNFP23560 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.88□□□□□ -1.79
BDNFP23560 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.88□□□□□ -1.79
BDNFP23560 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.88□□□□□ -1.79
BDNFP23560 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.88□□□□□ -1.79
BDNFP23560 FABP5P12-201ENST00000515543 389 ntBASIC3.88□□□□□ -1.79
BDNFP23560 AL121766.1-201ENST00000547436 487 ntBASIC3.88□□□□□ -1.79
BDNFP23560 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.88□□□□□ -1.79
BDNFP23560 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.88□□□□□ -1.79
BDNFP23560 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.88□□□□□ -1.79
BDNFP23560 MTCO3P24-201ENST00000572729 782 ntBASIC3.88□□□□□ -1.79
BDNFP23560 RPL23AP78-201ENST00000599928 470 ntBASIC3.88□□□□□ -1.79
BDNFP23560 AC107294.3-201ENST00000609211 526 ntBASIC3.88□□□□□ -1.79
BDNFP23560 AC006386.1-201ENST00000619436 415 ntBASIC3.88□□□□□ -1.79
BDNFP23560 MIR6075-201ENST00000620782 95 ntBASIC3.88□□□□□ -1.79
BDNFP23560 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
BDNFP23560 AC007823.1-201ENST00000569932 1566 ntBASIC3.88□□□□□ -1.79
BDNFP23560 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.88□□□□□ -1.79
BDNFP23560 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms