Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 AC034236.1-201ENST00000469891 373 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 AC108751.2-201ENST00000469993 231 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 DEFB109F-201ENST00000491870 277 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 HMGN1P13-201ENST00000505795 138 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 RNA5SP249-201ENST00000516127 99 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 RNA5SP43-201ENST00000516559 110 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 RNU7-30P-201ENST00000516835 62 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 AC012400.1-201ENST00000518452 381 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.88□□□□□ -1.63
CAPNS1P04632 SUB1P1-201ENST00000524415 382 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 AC022882.1-201ENST00000532142 501 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 OR5B10P-201ENST00000532869 642 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 AC023050.3-201ENST00000541142 333 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.88□□□□□ -1.63
CAPNS1P04632 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.88□□□□□ -1.63
CAPNS1P04632 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CAPNS1P04632 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.88□□□□□ -1.63
CAPNS1P04632 SNORD84-203ENST00000584275 78 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 AC093227.2-201ENST00000589357 285 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.88□□□□□ -1.63
CAPNS1P04632 AL670379.6-201ENST00000603753 252 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 AC008814.1-201ENST00000603797 406 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 AL670379.11-201ENST00000604059 253 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 AC008162.1-201ENST00000604718 254 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 AL670379.1-201ENST00000604752 252 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 IGHV3-29-201ENST00000604817 344 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 AL670379.5-201ENST00000605253 252 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 AL670379.12-201ENST00000605291 253 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 AL670379.8-201ENST00000605353 252 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 AL670379.7-201ENST00000605823 252 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 RMST_7.1-201ENST00000621935 268 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CAPNS1P04632 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.88□□□□□ -1.63
CAPNS1P04632 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CAPNS1P04632 SALL4P2-201ENST00000423288 2910 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CAPNS1P04632 Z73965.1-201ENST00000623412 2297 ntBASIC4.88□□□□□ -1.63
CAPNS1P04632 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CAPNS1P04632 SMG1P4-204ENST00000523028 4131 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CAPNS1P04632 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CAPNS1P04632 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CAPNS1P04632 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CAPNS1P04632 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CAPNS1P04632 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CAPNS1P04632 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CAPNS1P04632 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.87□□□□□ -1.63
CAPNS1P04632 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CAPNS1P04632 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CAPNS1P04632 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CAPNS1P04632 Z95331.1-201ENST00000623075 23112 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 XIAPP3-201ENST00000312918 795 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 RNU6-511P-201ENST00000363496 107 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 RNU6-1284P-201ENST00000363701 100 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 Y_RNA.231-201ENST00000364358 102 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 Y_RNA.384-201ENST00000383909 102 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 MIR153-1-201ENST00000384914 90 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CAPNS1P04632 RPL32P23-201ENST00000397237 405 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 RNU6-387P-201ENST00000411331 105 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.87□□□□□ -1.63
CAPNS1P04632 RPL21P24-201ENST00000413752 448 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 CKS1BP6-201ENST00000424932 240 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 MTCO3P46-201ENST00000425787 232 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.87□□□□□ -1.63
CAPNS1P04632 CKS1BP5-201ENST00000434172 273 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 IFNA20P-201ENST00000436840 528 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 snoU13.22-201ENST00000459428 104 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 RPL21P99-201ENST00000480369 423 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.87□□□□□ -1.63
CAPNS1P04632 AC006427.1-201ENST00000514359 712 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 RN7SKP256-201ENST00000517201 314 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.87□□□□□ -1.63
CAPNS1P04632 AC005868.1-201ENST00000536421 331 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 AC091979.2-201ENST00000607514 214 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 AC008785.1-201ENST00000624475 456 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 AC055839.1-201ENST00000634467 498 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 AC099654.10-201ENST00000640395 161 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CAPNS1P04632 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CAPNS1P04632 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.87□□□□□ -1.63
CAPNS1P04632 RPS4XP5-202ENST00000449995 1334 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CAPNS1P04632 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CAPNS1P04632 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CAPNS1P04632 AL157700.1-201ENST00000561973 1432 ntBASIC4.87□□□□□ -1.63
CAPNS1P04632 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CAPNS1P04632 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CAPNS1P04632 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CAPNS1P04632 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.87□□□□□ -1.63
CAPNS1P04632 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CAPNS1P04632 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CAPNS1P04632 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.86□□□□□ -1.63
CAPNS1P04632 AL592437.2-201ENST00000421655 2434 ntBASIC4.86□□□□□ -1.63
CAPNS1P04632 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CAPNS1P04632 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.86□□□□□ -1.63
CAPNS1P04632 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CAPNS1P04632 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.86□□□□□ -1.63
CAPNS1P04632 EXOC5P1-201ENST00000510543 1969 ntBASIC4.86□□□□□ -1.63
CAPNS1P04632 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms