Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL365184.2-201ENST00000431139 435 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.45□□□□□ -1.86
CLPTM1O96005 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.45□□□□□ -1.86
CLPTM1O96005 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.45□□□□□ -1.86
CLPTM1O96005 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.45□□□□□ -1.86
CLPTM1O96005 RPL21P89-201ENST00000444021 467 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 COX6CP2-201ENST00000444980 225 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.45□□□□□ -1.86
CLPTM1O96005 PABPC1P3-201ENST00000469174 459 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLPTM1O96005 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.45□□□□□ -1.86
CLPTM1O96005 RPS27AP1-201ENST00000475545 471 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 AC017015.1-201ENST00000477387 286 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.45□□□□□ -1.86
CLPTM1O96005 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.45□□□□□ -1.86
CLPTM1O96005 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.45□□□□□ -1.86
CLPTM1O96005 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.45□□□□□ -1.86
CLPTM1O96005 AC093767.1-201ENST00000504523 156 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 AC114967.1-201ENST00000504890 259 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.45□□□□□ -1.86
CLPTM1O96005 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.45□□□□□ -1.86
CLPTM1O96005 TMEM248P1-201ENST00000510579 951 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 FTH1P21-201ENST00000512179 511 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.45□□□□□ -1.86
CLPTM1O96005 AC026402.1-201ENST00000513642 170 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 RN7SKP244-201ENST00000516513 307 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.45□□□□□ -1.86
CLPTM1O96005 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.45□□□□□ -1.86
CLPTM1O96005 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLPTM1O96005 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.45□□□□□ -1.86
CLPTM1O96005 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.45□□□□□ -1.86
CLPTM1O96005 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.45□□□□□ -1.86
CLPTM1O96005 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.45□□□□□ -1.86
CLPTM1O96005 HSPE1P3-201ENST00000559254 309 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.45□□□□□ -1.86
CLPTM1O96005 PCMTD1P2-201ENST00000565017 355 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 MIR4474-201ENST00000579189 78 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 MIR548AB-201ENST00000584917 84 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.45□□□□□ -1.86
CLPTM1O96005 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.45□□□□□ -1.86
CLPTM1O96005 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.45□□□□□ -1.86
CLPTM1O96005 VN1R85P-201ENST00000601587 426 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 AC128687.1-201ENST00000605304 619 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.45□□□□□ -1.86
CLPTM1O96005 MIR6875-201ENST00000617506 72 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.45□□□□□ -1.86
CLPTM1O96005 AC009318.4-201ENST00000620496 486 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.45□□□□□ -1.86
CLPTM1O96005 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.45□□□□□ -1.86
CLPTM1O96005 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLPTM1O96005 AL079305.1-201ENST00000623159 3008 ntBASIC3.45□□□□□ -1.86
CLPTM1O96005 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLPTM1O96005 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.45□□□□□ -1.86
CLPTM1O96005 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.45□□□□□ -1.86
CLPTM1O96005 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLPTM1O96005 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLPTM1O96005 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CLPTM1O96005 RNU5F-6P-201ENST00000362979 116 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 Y_RNA.194-201ENST00000363985 102 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 Y_RNA.559-201ENST00000384686 107 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 RNU6-952P-201ENST00000391164 108 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 BTBD10P2-201ENST00000404779 676 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 PPIAP31-201ENST00000405422 495 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 AC109780.2-201ENST00000413467 845 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 AC126124.2-201ENST00000413542 321 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 AC245291.1-201ENST00000419501 328 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 MTCO2P34-201ENST00000421994 607 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.44□□□□□ -1.86
CLPTM1O96005 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.44□□□□□ -1.86
CLPTM1O96005 RPL23AP22-201ENST00000437556 453 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 LSM1P1-201ENST00000438629 273 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.44□□□□□ -1.86
CLPTM1O96005 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.44□□□□□ -1.86
CLPTM1O96005 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.44□□□□□ -1.86
CLPTM1O96005 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.44□□□□□ -1.86
CLPTM1O96005 AC005297.2-201ENST00000450430 606 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.44□□□□□ -1.86
CLPTM1O96005 BX322784.1-201ENST00000455793 1077 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 AC116337.2-201ENST00000477662 156 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 AC110792.1-201ENST00000491826 472 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 RNF138P1-201ENST00000502765 546 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.44□□□□□ -1.86
CLPTM1O96005 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLPTM1O96005 MTND5P4-201ENST00000514978 288 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 RNA5SP216-201ENST00000516111 123 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 RNA5SP208-201ENST00000516156 78 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 AC068657.1-201ENST00000520807 306 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLPTM1O96005 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.44□□□□□ -1.86
CLPTM1O96005 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.44□□□□□ -1.86
CLPTM1O96005 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.44□□□□□ -1.86
CLPTM1O96005 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.44□□□□□ -1.86
CLPTM1O96005 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.44□□□□□ -1.86
CLPTM1O96005 AC120057.2-201ENST00000571520 271 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 AC012213.3-201ENST00000577199 777 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 MIR3611-201ENST00000584484 83 ntBASIC3.44□□□□□ -1.86
CLPTM1O96005 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.44□□□□□ -1.86
CLPTM1O96005 BNIP3P23-201ENST00000599655 511 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms