Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 RPL21P17-201ENST00000397467 475 ntBASIC3.95□□□□□ -1.78
RTN3O95197 HLFP1-201ENST00000402375 499 ntBASIC3.95□□□□□ -1.78
RTN3O95197 MTHFD2P2-201ENST00000407725 247 ntBASIC3.95□□□□□ -1.78
RTN3O95197 RNU2-43P-201ENST00000410306 190 ntBASIC3.95□□□□□ -1.78
RTN3O95197 HMGB1P11-201ENST00000413899 637 ntBASIC3.95□□□□□ -1.78
RTN3O95197 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.95□□□□□ -1.78
RTN3O95197 BX119904.4-201ENST00000424402 301 ntBASIC3.95□□□□□ -1.78
RTN3O95197 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.95□□□□□ -1.78
RTN3O95197 CETN4P-201ENST00000432407 469 ntBASIC3.95□□□□□ -1.78
RTN3O95197 UBE2D3P1-201ENST00000436669 444 ntBASIC3.95□□□□□ -1.78
RTN3O95197 MTCYBP39-201ENST00000437562 491 ntBASIC3.95□□□□□ -1.78
RTN3O95197 RSU1P2-202ENST00000437884 485 ntBASIC3.95□□□□□ -1.78
RTN3O95197 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.95□□□□□ -1.78
RTN3O95197 AC108734.1-201ENST00000439549 399 ntBASIC3.95□□□□□ -1.78
RTN3O95197 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.95□□□□□ -1.78
RTN3O95197 AC098824.1-201ENST00000453565 980 ntBASIC3.95□□□□□ -1.78
RTN3O95197 AC104308.1-201ENST00000454621 333 ntBASIC3.95□□□□□ -1.78
RTN3O95197 HMGN2P16-201ENST00000456802 261 ntBASIC3.95□□□□□ -1.78
RTN3O95197 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.95□□□□□ -1.78
RTN3O95197 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RTN3O95197 RAC1P2-201ENST00000511164 579 ntBASIC3.95□□□□□ -1.78
RTN3O95197 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.95□□□□□ -1.78
RTN3O95197 RNU1-95P-201ENST00000516357 160 ntBASIC3.95□□□□□ -1.78
RTN3O95197 RNU1-128P-201ENST00000516704 160 ntBASIC3.95□□□□□ -1.78
RTN3O95197 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.95□□□□□ -1.78
RTN3O95197 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.95□□□□□ -1.78
RTN3O95197 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.95□□□□□ -1.78
RTN3O95197 AC007954.1-201ENST00000554198 494 ntBASIC3.95□□□□□ -1.78
RTN3O95197 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.95□□□□□ -1.78
RTN3O95197 AC090616.2-202ENST00000584248 222 ntBASIC3.95□□□□□ -1.78
RTN3O95197 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.95□□□□□ -1.78
RTN3O95197 BNIP3P23-201ENST00000599655 511 ntBASIC3.95□□□□□ -1.78
RTN3O95197 AP001330.4-201ENST00000604350 154 ntBASIC3.95□□□□□ -1.78
RTN3O95197 AC097468.3-201ENST00000607956 456 ntBASIC3.95□□□□□ -1.78
RTN3O95197 RNVU1-4-201ENST00000612985 164 ntBASIC3.95□□□□□ -1.78
RTN3O95197 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RTN3O95197 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RTN3O95197 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.95□□□□□ -1.78
RTN3O95197 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RTN3O95197 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
RTN3O95197 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.95□□□□□ -1.78
RTN3O95197 TAB3P1-202ENST00000452645 1634 ntBASIC3.95□□□□□ -1.78
RTN3O95197 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
RTN3O95197 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.94□□□□□ -1.78
RTN3O95197 ZNF285B-201ENST00000561698 1767 ntBASIC3.94□□□□□ -1.78
RTN3O95197 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RTN3O95197 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RTN3O95197 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RTN3O95197 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RTN3O95197 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RTN3O95197 SNORA70.4-201ENST00000365509 134 ntBASIC3.94□□□□□ -1.78
RTN3O95197 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RTN3O95197 DEFB109C-201ENST00000382575 264 ntBASIC3.94□□□□□ -1.78
RTN3O95197 DEFB109B-201ENST00000382656 264 ntBASIC3.94□□□□□ -1.78
RTN3O95197 Y_RNA.548-201ENST00000384656 105 ntBASIC3.94□□□□□ -1.78
RTN3O95197 MIR184-201ENST00000384962 84 ntBASIC3.94□□□□□ -1.78
RTN3O95197 RNA5SP424-201ENST00000390988 115 ntBASIC3.94□□□□□ -1.78
RTN3O95197 AF228730.1-201ENST00000397972 663 ntBASIC3.94□□□□□ -1.78
RTN3O95197 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.94□□□□□ -1.78
RTN3O95197 SSXP9-201ENST00000417503 292 ntBASIC3.94□□□□□ -1.78
RTN3O95197 AL590103.1-201ENST00000434488 307 ntBASIC3.94□□□□□ -1.78
RTN3O95197 SNORA71B-202ENST00000439232 272 ntBASIC3.94□□□□□ -1.78
RTN3O95197 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.94□□□□□ -1.78
RTN3O95197 MTND1P9-201ENST00000453775 944 ntBASIC3.94□□□□□ -1.78
RTN3O95197 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.94□□□□□ -1.78
RTN3O95197 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.94□□□□□ -1.78
RTN3O95197 UBDP1-202ENST00000457888 382 ntBASIC3.94□□□□□ -1.78
RTN3O95197 AC010468.1-201ENST00000461022 817 ntBASIC3.94□□□□□ -1.78
RTN3O95197 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.94□□□□□ -1.78
RTN3O95197 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.94□□□□□ -1.78
RTN3O95197 SNORA31.8-201ENST00000516327 108 ntBASIC3.94□□□□□ -1.78
RTN3O95197 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.94□□□□□ -1.78
RTN3O95197 SUMO2P20-201ENST00000520803 283 ntBASIC3.94□□□□□ -1.78
RTN3O95197 AP003497.1-201ENST00000528472 562 ntBASIC3.94□□□□□ -1.78
RTN3O95197 AP004247.1-201ENST00000531556 1289 ntBASIC3.94□□□□□ -1.78
RTN3O95197 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.94□□□□□ -1.78
RTN3O95197 AL845331.3-202ENST00000562856 261 ntBASIC3.94□□□□□ -1.78
RTN3O95197 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.94□□□□□ -1.78
RTN3O95197 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.94□□□□□ -1.78
RTN3O95197 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.94□□□□□ -1.78
RTN3O95197 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.94□□□□□ -1.78
RTN3O95197 AC012443.1-201ENST00000605605 231 ntBASIC3.94□□□□□ -1.78
RTN3O95197 RNU1-30P-201ENST00000606575 163 ntBASIC3.94□□□□□ -1.78
RTN3O95197 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.94□□□□□ -1.78
RTN3O95197 AC004223.4-201ENST00000612426 332 ntBASIC3.94□□□□□ -1.78
RTN3O95197 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.94□□□□□ -1.78
RTN3O95197 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.93□□□□□ -1.78
RTN3O95197 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RTN3O95197 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RTN3O95197 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.93□□□□□ -1.78
RTN3O95197 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RTN3O95197 RNU6-853P-201ENST00000364306 107 ntBASIC3.93□□□□□ -1.78
RTN3O95197 SNORA5A-201ENST00000384111 134 ntBASIC3.93□□□□□ -1.78
RTN3O95197 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.93□□□□□ -1.78
RTN3O95197 AC007066.1-201ENST00000392902 381 ntBASIC3.93□□□□□ -1.78
RTN3O95197 AL136372.1-201ENST00000403060 228 ntBASIC3.93□□□□□ -1.78
RTN3O95197 AL035423.1-201ENST00000420331 213 ntBASIC3.93□□□□□ -1.78
RTN3O95197 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.93□□□□□ -1.78
RTN3O95197 GOT2P5-201ENST00000433995 546 ntBASIC3.93□□□□□ -1.78
RTN3O95197 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms