Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MYL12AP1-201ENST00000518490 515 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM13O60858 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM13O60858 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM13O60858 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM13O60858 FKBP1BP1-201ENST00000553366 325 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 AL049839.1-201ENST00000556151 657 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 AC011447.4-201ENST00000587562 111 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 AF038458.1-201ENST00000588406 262 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM13O60858 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM13O60858 AC126915.2-201ENST00000610957 190 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 MIR6778-201ENST00000617912 73 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 AL022401.1-201ENST00000619498 108 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM13O60858 SNORA17.5-201ENST00000630429 132 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 AC004972.1-201ENST00000623934 2209 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM13O60858 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
TRIM13O60858 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM13O60858 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM13O60858 PNPT1P2-201ENST00000456768 2050 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 API5P2-201ENST00000397055 1498 ntBASIC4.74□□□□□ -1.65
TRIM13O60858 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM13O60858 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TRIM13O60858 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM13O60858 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
TRIM13O60858 XPOTP1-201ENST00000443317 2398 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 AC107081.3-201ENST00000612715 2034 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM13O60858 SMG1P6-201ENST00000532337 2930 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM13O60858 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM13O60858 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM13O60858 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM13O60858 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM13O60858 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM13O60858 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TRIM13O60858 AL139397.2-201ENST00000404529 772 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 OR3A2-201ENST00000408891 1076 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 RNU6-954P-201ENST00000411355 107 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 TPMTP2-201ENST00000414372 726 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM13O60858 RPL7L1P10-201ENST00000427790 463 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 ARL5AP4-201ENST00000430731 512 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM13O60858 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM13O60858 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM13O60858 RN7SL222P-201ENST00000476452 299 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 TMEM251P1-201ENST00000503717 318 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 VN1R104P-201ENST00000505115 1009 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 RNA5SP362-201ENST00000516048 118 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 RNU6-273P-201ENST00000516937 96 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM13O60858 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TRIM13O60858 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM13O60858 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM13O60858 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM13O60858 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM13O60858 RPL21P7-201ENST00000557463 483 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 AC113195.1-201ENST00000579952 141 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 AC069061.3-201ENST00000582254 823 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 SNORD39.3-201ENST00000584451 71 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM13O60858 AL121932.1-201ENST00000605542 214 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 AL008729.2-201ENST00000606393 473 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 U2.1-201ENST00000618978 145 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 AC098657.3-201ENST00000620434 263 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 AC140113.4-201ENST00000622087 222 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 AC005086.4-201ENST00000623065 213 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 CR381572.1-201ENST00000625098 102 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM13O60858 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM13O60858 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM13O60858 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM13O60858 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.73□□□□□ -1.65
TRIM13O60858 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM13O60858 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM13O60858 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM13O60858 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM13O60858 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM13O60858 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
TRIM13O60858 THAP12P4-201ENST00000528321 2266 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM13O60858 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM13O60858 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM13O60858 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM13O60858 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM13O60858 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM13O60858 SNURFL-201ENST00000309296 343 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 RPL23AP57-201ENST00000332361 466 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM13O60858 Y_RNA.80-201ENST00000362996 102 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 RNU6-984P-201ENST00000363236 109 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 RNA5SP242-201ENST00000364171 118 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 RNU6-99P-201ENST00000364721 107 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 MIR195-201ENST00000385194 87 ntBASIC4.72□□□□□ -1.65
TRIM13O60858 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms