Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 AC008669.1-201ENST00000565823 2178 ntBASIC2.58□□□□□ -2
SNAI2O43623 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.58□□□□□ -2
SNAI2O43623 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.58□□□□□ -2
SNAI2O43623 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.58□□□□□ -2
SNAI2O43623 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
SNAI2O43623 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SNAI2O43623 AP004289.2-201ENST00000444413 1457 ntBASIC2.58□□□□□ -2
SNAI2O43623 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.58□□□□□ -2
SNAI2O43623 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
SNAI2O43623 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SNAI2O43623 AC026241.1-201ENST00000517873 2142 ntBASIC2.57□□□□□ -2
SNAI2O43623 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.57□□□□□ -2
SNAI2O43623 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
SNAI2O43623 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.57□□□□□ -2
SNAI2O43623 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.57□□□□□ -2
SNAI2O43623 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SNAI2O43623 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
SNAI2O43623 RNA5SP383-201ENST00000362934 120 ntBASIC2.57□□□□□ -2
SNAI2O43623 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.57□□□□□ -2
SNAI2O43623 AL024474.1-201ENST00000404655 591 ntBASIC2.57□□□□□ -2
SNAI2O43623 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.57□□□□□ -2
SNAI2O43623 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC2.57□□□□□ -2
SNAI2O43623 AL139281.1-201ENST00000422120 335 ntBASIC2.57□□□□□ -2
SNAI2O43623 BX890604.2-201ENST00000427883 474 ntBASIC2.57□□□□□ -2
SNAI2O43623 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.57□□□□□ -2
SNAI2O43623 CETN4P-201ENST00000432407 469 ntBASIC2.57□□□□□ -2
SNAI2O43623 RPL23AP22-201ENST00000437556 453 ntBASIC2.57□□□□□ -2
SNAI2O43623 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC2.57□□□□□ -2
SNAI2O43623 AL133162.1-201ENST00000463228 453 ntBASIC2.57□□□□□ -2
SNAI2O43623 AC091564.1-201ENST00000464563 479 ntBASIC2.57□□□□□ -2
SNAI2O43623 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.57□□□□□ -2
SNAI2O43623 AC004263.1-201ENST00000479327 332 ntBASIC2.57□□□□□ -2
SNAI2O43623 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.57□□□□□ -2
SNAI2O43623 AC093278.1-201ENST00000494700 600 ntBASIC2.57□□□□□ -2
SNAI2O43623 MTCYBP17-201ENST00000503579 789 ntBASIC2.57□□□□□ -2
SNAI2O43623 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.57□□□□□ -2
SNAI2O43623 HMGB1P28-201ENST00000507778 552 ntBASIC2.57□□□□□ -2
SNAI2O43623 HSPE1P23-201ENST00000509838 286 ntBASIC2.57□□□□□ -2
SNAI2O43623 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.57□□□□□ -2
SNAI2O43623 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC2.57□□□□□ -2
SNAI2O43623 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.57□□□□□ -2
SNAI2O43623 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.57□□□□□ -2
SNAI2O43623 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.57□□□□□ -2
SNAI2O43623 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.57□□□□□ -2
SNAI2O43623 HMGB1P14-201ENST00000557424 591 ntBASIC2.57□□□□□ -2
SNAI2O43623 AC087465.1-201ENST00000560574 245 ntBASIC2.57□□□□□ -2
SNAI2O43623 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.57□□□□□ -2
SNAI2O43623 AC011260.1-201ENST00000578420 472 ntBASIC2.57□□□□□ -2
SNAI2O43623 OR4K7P-201ENST00000580232 945 ntBASIC2.57□□□□□ -2
SNAI2O43623 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
SNAI2O43623 NIFKP6-201ENST00000598115 845 ntBASIC2.57□□□□□ -2
SNAI2O43623 AP003485.2-201ENST00000623636 610 ntBASIC2.57□□□□□ -2
SNAI2O43623 AC120349.2-201ENST00000625002 298 ntBASIC2.57□□□□□ -2
SNAI2O43623 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.57□□□□□ -2
SNAI2O43623 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
SNAI2O43623 GDI2P1-201ENST00000429312 1336 ntBASIC2.57□□□□□ -2
SNAI2O43623 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.57□□□□□ -2
SNAI2O43623 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SNAI2O43623 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.57□□□□□ -2
SNAI2O43623 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
SNAI2O43623 AC010680.1-201ENST00000590024 3590 ntBASIC2.56□□□□□ -2
SNAI2O43623 AC017071.1-201ENST00000564407 2204 ntBASIC2.56□□□□□ -2
SNAI2O43623 Y_RNA.25-201ENST00000362528 102 ntBASIC2.56□□□□□ -2
SNAI2O43623 RNU6-621P-201ENST00000364752 109 ntBASIC2.56□□□□□ -2
SNAI2O43623 Y_RNA.311-201ENST00000365068 96 ntBASIC2.56□□□□□ -2
SNAI2O43623 SNORD21-201ENST00000383953 95 ntBASIC2.56□□□□□ -2
SNAI2O43623 RNU1-109P-201ENST00000383960 147 ntBASIC2.56□□□□□ -2
SNAI2O43623 RNU2-28P-201ENST00000410457 189 ntBASIC2.56□□□□□ -2
SNAI2O43623 RPL19P1-201ENST00000411635 428 ntBASIC2.56□□□□□ -2
SNAI2O43623 RAP1BP1-201ENST00000412709 553 ntBASIC2.56□□□□□ -2
SNAI2O43623 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.56□□□□□ -2
SNAI2O43623 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC2.56□□□□□ -2
SNAI2O43623 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.56□□□□□ -2
SNAI2O43623 AL139247.1-201ENST00000422768 325 ntBASIC2.56□□□□□ -2
SNAI2O43623 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.56□□□□□ -2
SNAI2O43623 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.56□□□□□ -2
SNAI2O43623 GAS5-208ENST00000425771 242 ntTSL 3 BASIC2.56□□□□□ -2
SNAI2O43623 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.56□□□□□ -2
SNAI2O43623 AC093151.1-201ENST00000427711 313 ntBASIC2.56□□□□□ -2
SNAI2O43623 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.56□□□□□ -2
SNAI2O43623 NDUFB4P6-201ENST00000436819 366 ntBASIC2.56□□□□□ -2
SNAI2O43623 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC2.56□□□□□ -2
SNAI2O43623 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.56□□□□□ -2
SNAI2O43623 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.56□□□□□ -2
SNAI2O43623 MTND1P16-201ENST00000465177 898 ntBASIC2.56□□□□□ -2
SNAI2O43623 RPL7P18-201ENST00000478965 734 ntBASIC2.56□□□□□ -2
SNAI2O43623 MTND2P14-201ENST00000482139 351 ntBASIC2.56□□□□□ -2
SNAI2O43623 RPL7P38-201ENST00000488396 739 ntBASIC2.56□□□□□ -2
SNAI2O43623 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.56□□□□□ -2
SNAI2O43623 HSPD1P15-201ENST00000505573 1122 ntBASIC2.56□□□□□ -2
SNAI2O43623 AC010587.2-201ENST00000511727 448 ntBASIC2.56□□□□□ -2
SNAI2O43623 AC109445.1-201ENST00000512356 383 ntBASIC2.56□□□□□ -2
SNAI2O43623 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.56□□□□□ -2
SNAI2O43623 SNORA3.4-201ENST00000515969 96 ntBASIC2.56□□□□□ -2
SNAI2O43623 SNORA70.16-201ENST00000516390 95 ntBASIC2.56□□□□□ -2
SNAI2O43623 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.56□□□□□ -2
SNAI2O43623 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.56□□□□□ -2
SNAI2O43623 AC104027.1-201ENST00000521887 300 ntBASIC2.56□□□□□ -2
SNAI2O43623 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.56□□□□□ -2
SNAI2O43623 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms