Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TO15178 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
TO15178 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.52□□□□□ -1.85
TO15178 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.52□□□□□ -1.85
TO15178 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TO15178 RPL7P8-201ENST00000411964 730 ntBASIC3.52□□□□□ -1.85
TO15178 RPL36AP36-201ENST00000418616 301 ntBASIC3.52□□□□□ -1.85
TO15178 AL137014.1-201ENST00000420490 1226 ntBASIC3.52□□□□□ -1.85
TO15178 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.52□□□□□ -1.85
TO15178 RPS27AP14-201ENST00000422868 454 ntBASIC3.52□□□□□ -1.85
TO15178 AL365184.2-201ENST00000431139 435 ntBASIC3.52□□□□□ -1.85
TO15178 RPL37P21-201ENST00000435890 276 ntBASIC3.52□□□□□ -1.85
TO15178 CDC27P1-201ENST00000445384 715 ntBASIC3.52□□□□□ -1.85
TO15178 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.52□□□□□ -1.85
TO15178 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.52□□□□□ -1.85
TO15178 KATNBL1P6-201ENST00000453433 915 ntBASIC3.52□□□□□ -1.85
TO15178 RN7SL330P-201ENST00000469709 307 ntBASIC3.52□□□□□ -1.85
TO15178 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TO15178 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.52□□□□□ -1.85
TO15178 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.52□□□□□ -1.85
TO15178 AC021146.1-201ENST00000511202 716 ntBASIC3.52□□□□□ -1.85
TO15178 OR5BM1P-201ENST00000512021 366 ntBASIC3.52□□□□□ -1.85
TO15178 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.52□□□□□ -1.85
TO15178 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TO15178 RNU1-61P-201ENST00000516107 151 ntBASIC3.52□□□□□ -1.85
TO15178 RNU6-352P-201ENST00000516908 107 ntBASIC3.52□□□□□ -1.85
TO15178 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.52□□□□□ -1.85
TO15178 SUMO2P20-201ENST00000520803 283 ntBASIC3.52□□□□□ -1.85
TO15178 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.52□□□□□ -1.85
TO15178 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.52□□□□□ -1.85
TO15178 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.52□□□□□ -1.85
TO15178 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.52□□□□□ -1.85
TO15178 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.52□□□□□ -1.85
TO15178 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.52□□□□□ -1.85
TO15178 ROCK1P1-201ENST00000573767 549 ntBASIC3.52□□□□□ -1.85
TO15178 MIR5685-201ENST00000579080 79 ntBASIC3.52□□□□□ -1.85
TO15178 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.52□□□□□ -1.85
TO15178 AP001029.3-201ENST00000588063 596 ntBASIC3.52□□□□□ -1.85
TO15178 AC010620.1-201ENST00000601088 1102 ntBASIC3.52□□□□□ -1.85
TO15178 AL590229.1-201ENST00000603497 542 ntBASIC3.52□□□□□ -1.85
TO15178 AC011451.2-201ENST00000604303 598 ntBASIC3.52□□□□□ -1.85
TO15178 AC005344.1-201ENST00000613391 459 ntBASIC3.52□□□□□ -1.85
TO15178 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.52□□□□□ -1.85
TO15178 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
TO15178 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TO15178 AC006378.2-201ENST00000623178 2476 ntBASIC3.52□□□□□ -1.85
TO15178 ZNF833P-201ENST00000424938 1494 ntBASIC3.52□□□□□ -1.85
TO15178 AC024560.2-201ENST00000507981 1497 ntBASIC3.52□□□□□ -1.85
TO15178 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TO15178 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TO15178 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TO15178 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TO15178 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TO15178 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TO15178 RPL7P26-201ENST00000333817 754 ntBASIC3.51□□□□□ -1.85
TO15178 RNU6-853P-201ENST00000364306 107 ntBASIC3.51□□□□□ -1.85
TO15178 MIR30B-201ENST00000384850 88 ntBASIC3.51□□□□□ -1.85
TO15178 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
TO15178 SKINT1L-201ENST00000401057 817 ntBASIC3.51□□□□□ -1.85
TO15178 AL021407.1-201ENST00000404531 386 ntBASIC3.51□□□□□ -1.85
TO15178 AL356967.1-201ENST00000406305 431 ntBASIC3.51□□□□□ -1.85
TO15178 MIR1302-8-201ENST00000408342 128 ntBASIC3.51□□□□□ -1.85
TO15178 AC109780.2-201ENST00000413467 845 ntBASIC3.51□□□□□ -1.85
TO15178 RPL30P2-201ENST00000414021 291 ntBASIC3.51□□□□□ -1.85
TO15178 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.51□□□□□ -1.85
TO15178 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TO15178 OR1AA1P-201ENST00000419597 916 ntBASIC3.51□□□□□ -1.85
TO15178 AL389915.1-201ENST00000422463 466 ntBASIC3.51□□□□□ -1.85
TO15178 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.51□□□□□ -1.85
TO15178 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.51□□□□□ -1.85
TO15178 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.51□□□□□ -1.85
TO15178 AC108734.1-201ENST00000439549 399 ntBASIC3.51□□□□□ -1.85
TO15178 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.51□□□□□ -1.85
TO15178 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.51□□□□□ -1.85
TO15178 HMGB3P8-201ENST00000449709 577 ntBASIC3.51□□□□□ -1.85
TO15178 AC006480.1-201ENST00000449887 378 ntBASIC3.51□□□□□ -1.85
TO15178 RPS27AP8-201ENST00000452665 445 ntBASIC3.51□□□□□ -1.85
TO15178 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.51□□□□□ -1.85
TO15178 RPL23AP14-201ENST00000468281 468 ntBASIC3.51□□□□□ -1.85
TO15178 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.51□□□□□ -1.85
TO15178 AC109486.1-201ENST00000486833 374 ntBASIC3.51□□□□□ -1.85
TO15178 AC093278.1-201ENST00000494700 600 ntBASIC3.51□□□□□ -1.85
TO15178 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.51□□□□□ -1.85
TO15178 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.51□□□□□ -1.85
TO15178 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.51□□□□□ -1.85
TO15178 RAC1P2-201ENST00000511164 579 ntBASIC3.51□□□□□ -1.85
TO15178 NPM1P41-201ENST00000512920 831 ntBASIC3.51□□□□□ -1.85
TO15178 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.51□□□□□ -1.85
TO15178 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.51□□□□□ -1.85
TO15178 AL356057.1-201ENST00000533798 831 ntBASIC3.51□□□□□ -1.85
TO15178 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.51□□□□□ -1.85
TO15178 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.51□□□□□ -1.85
TO15178 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.51□□□□□ -1.85
TO15178 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.51□□□□□ -1.85
TO15178 GTF2IP22-201ENST00000554443 182 ntBASIC3.51□□□□□ -1.85
TO15178 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.51□□□□□ -1.85
TO15178 HSPE1P5-201ENST00000561489 272 ntBASIC3.51□□□□□ -1.85
TO15178 MIR4474-201ENST00000579189 78 ntBASIC3.51□□□□□ -1.85
TO15178 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.51□□□□□ -1.85
TO15178 AC093227.2-201ENST00000589357 285 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms