Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.46□□□□□ -1.54
GPC6Q9Y625 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
GPC6Q9Y625 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
GPC6Q9Y625 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
GPC6Q9Y625 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
GPC6Q9Y625 AL137003.2-201ENST00000606924 2538 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
GPC6Q9Y625 AC009962.1-201ENST00000567327 3813 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 THAP12P5-201ENST00000405864 2275 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
GPC6Q9Y625 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
GPC6Q9Y625 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
GPC6Q9Y625 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
GPC6Q9Y625 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
GPC6Q9Y625 RN7SKP78-201ENST00000364711 318 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 RPL11P3-201ENST00000395256 523 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.45□□□□□ -1.54
GPC6Q9Y625 RPS17P8-201ENST00000434525 335 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.45□□□□□ -1.54
GPC6Q9Y625 AC005077.1-201ENST00000449226 375 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 PRELID3BP1-201ENST00000457142 540 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 RN7SL170P-201ENST00000487098 295 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.45□□□□□ -1.54
GPC6Q9Y625 LSM3P4-201ENST00000502948 309 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.45□□□□□ -1.54
GPC6Q9Y625 GLUD1P3-202ENST00000508551 200 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.45□□□□□ -1.54
GPC6Q9Y625 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.45□□□□□ -1.54
GPC6Q9Y625 RNA5SP473-201ENST00000516402 125 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 RN7SKP82-201ENST00000516786 223 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 RNU6-111P-201ENST00000517179 105 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 AC069113.1-201ENST00000517763 267 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 IGKV3D-25-201ENST00000519599 235 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.45□□□□□ -1.54
GPC6Q9Y625 CBX3P8-201ENST00000532412 525 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.45□□□□□ -1.54
GPC6Q9Y625 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.45□□□□□ -1.54
GPC6Q9Y625 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.45□□□□□ -1.54
GPC6Q9Y625 AC067852.3-201ENST00000589177 561 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.45□□□□□ -1.54
GPC6Q9Y625 MIR1244-1-201ENST00000612829 85 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 MIR1244-3-201ENST00000635744 85 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 MIR1244-2-201ENST00000636449 85 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 MIR1244-4-202ENST00000636813 85 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.45□□□□□ -1.54
GPC6Q9Y625 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
GPC6Q9Y625 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
GPC6Q9Y625 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.45□□□□□ -1.54
GPC6Q9Y625 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.45□□□□□ -1.54
GPC6Q9Y625 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
GPC6Q9Y625 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
GPC6Q9Y625 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
GPC6Q9Y625 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
GPC6Q9Y625 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
GPC6Q9Y625 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
GPC6Q9Y625 IRF5P1-201ENST00000504852 2164 ntBASIC5.45□□□□□ -1.54
GPC6Q9Y625 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
GPC6Q9Y625 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
GPC6Q9Y625 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
GPC6Q9Y625 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
GPC6Q9Y625 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
GPC6Q9Y625 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
GPC6Q9Y625 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
GPC6Q9Y625 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
GPC6Q9Y625 RNU6-249P-201ENST00000363016 102 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 RNU6-770P-201ENST00000363929 105 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 RNU6-200P-201ENST00000364743 107 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
GPC6Q9Y625 Y_RNA.551-201ENST00000384661 102 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 MIR130B-202ENST00000385018 82 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 RNU6-1093P-201ENST00000391194 107 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 RNA5SP296-201ENST00000410523 111 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 RPL21P90-201ENST00000415692 466 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.44□□□□□ -1.54
GPC6Q9Y625 AC006946.1-201ENST00000429106 328 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 ATP5LP2-201ENST00000440646 311 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 AC004129.2-201ENST00000457229 287 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 RN7SL269P-201ENST00000467795 305 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
GPC6Q9Y625 RNU7-4P-201ENST00000516961 62 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 RNU6-182P-201ENST00000516970 105 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.44□□□□□ -1.54
GPC6Q9Y625 AC007956.1-201ENST00000555623 542 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.44□□□□□ -1.54
GPC6Q9Y625 MIR4472-2-201ENST00000582069 67 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.44□□□□□ -1.54
GPC6Q9Y625 AC116447.1-201ENST00000613153 453 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
GPC6Q9Y625 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.44□□□□□ -1.54
GPC6Q9Y625 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.44□□□□□ -1.54
GPC6Q9Y625 AC130454.1-201ENST00000622948 401 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 AC093775.1-201ENST00000624154 1868 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.44□□□□□ -1.54
GPC6Q9Y625 MFSD8-239ENST00000641590 2479 ntBASIC5.44□□□□□ -1.54
GPC6Q9Y625 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
GPC6Q9Y625 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
GPC6Q9Y625 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
GPC6Q9Y625 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
GPC6Q9Y625 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms