Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 ARL2BPP5-201ENST00000523141 481 ntBASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 AC069234.5-201ENST00000611056 416 ntBASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 AC107871.2-201ENST00000612894 502 ntBASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 AL512506.2-201ENST00000624472 458 ntBASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPC1L1Q9UHC9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 AC111188.2-201ENST00000529697 1387 ntBASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 RNU6-859P-201ENST00000362728 107 ntBASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 AC096533.1-201ENST00000411645 353 ntBASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 AC019097.1-201ENST00000424783 735 ntBASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 AC092634.2-201ENST00000428146 1010 ntBASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 NF1P3-201ENST00000457709 450 ntBASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 TMEM248P1-201ENST00000510579 951 ntBASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 RNA5SP76-201ENST00000516277 87 ntBASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 LSM6P2-201ENST00000552208 177 ntBASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 ZNF971P-201ENST00000562068 1249 ntBASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 AC090616.5-202ENST00000582111 297 ntBASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 AC090330.1-201ENST00000588646 764 ntBASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 BNIP3P27-201ENST00000599991 412 ntBASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 AP000238.1-201ENST00000608759 426 ntBASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 AC093673.2-201ENST00000609674 331 ntBASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 AL049777.1-201ENST00000622740 518 ntBASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 AL359757.2-201ENST00000624309 274 ntBASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NPC1L1Q9UHC9 HMGB1P5-201ENST00000255320 642 ntBASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 MIR649-201ENST00000384843 97 ntBASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 AL031679.1-201ENST00000400616 525 ntBASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 AL603865.2-201ENST00000401679 213 ntBASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 AL356057.3-201ENST00000402607 340 ntBASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 AL139098.1-201ENST00000407291 389 ntBASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 RNA5SP344-201ENST00000411081 104 ntBASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 MTCYBP24-201ENST00000420387 1106 ntBASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 AC005517.2-201ENST00000424673 553 ntBASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 NDUFA5P7-201ENST00000452914 242 ntBASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 AC244505.3-201ENST00000454598 187 ntBASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 RN7SL297P-201ENST00000483161 293 ntBASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 AC017037.2-201ENST00000513850 890 ntBASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 RNU6-1028P-201ENST00000517164 93 ntBASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 AC010376.1-201ENST00000522101 334 ntBASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 AP003973.1-201ENST00000604639 691 ntBASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 AP003485.1-201ENST00000625093 753 ntBASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 LRRC77P-213ENST00000637727 880 ntBASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
NPC1L1Q9UHC9 AC093908.1-201ENST00000623125 8092 ntBASIC3.65□□□□□ -1.83
NPC1L1Q9UHC9 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.65□□□□□ -1.83
NPC1L1Q9UHC9 AC091152.2-201ENST00000591628 2569 ntBASIC3.65□□□□□ -1.83
NPC1L1Q9UHC9 RNU1-100P-201ENST00000365255 165 ntBASIC3.64□□□□□ -1.83
NPC1L1Q9UHC9 RNU6-1226P-201ENST00000384317 107 ntBASIC3.64□□□□□ -1.83
NPC1L1Q9UHC9 MIR1261-201ENST00000408659 82 ntBASIC3.64□□□□□ -1.83
NPC1L1Q9UHC9 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.64□□□□□ -1.83
NPC1L1Q9UHC9 EI24P1-201ENST00000416584 867 ntBASIC3.64□□□□□ -1.83
NPC1L1Q9UHC9 YPEL5P1-201ENST00000419731 367 ntBASIC3.64□□□□□ -1.83
NPC1L1Q9UHC9 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.64□□□□□ -1.83
NPC1L1Q9UHC9 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.64□□□□□ -1.83
NPC1L1Q9UHC9 SNRPGP3-201ENST00000469405 227 ntBASIC3.64□□□□□ -1.83
NPC1L1Q9UHC9 HMGB1P38-201ENST00000490557 577 ntBASIC3.64□□□□□ -1.83
NPC1L1Q9UHC9 AC011352.3-201ENST00000505162 593 ntBASIC3.64□□□□□ -1.83
NPC1L1Q9UHC9 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.64□□□□□ -1.83
NPC1L1Q9UHC9 AC006445.2-201ENST00000510061 472 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms