Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC100810.6-201ENST00000638068 285 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 SAMMSON-213ENST00000641336 1521 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 AC090971.4-201ENST00000560291 1800 ntBASIC4.39□□□□□ -1.71
NDC1Q9BTX1 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.39□□□□□ -1.71
NDC1Q9BTX1 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 OR56B2P-202ENST00000641377 2453 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 RPL7P26-201ENST00000333817 754 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 RNU4-79P-201ENST00000362764 141 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 Y_RNA.460-201ENST00000384255 102 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 RPL7P60-201ENST00000397636 735 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 SDHCP2-201ENST00000398565 501 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 AL591416.1-201ENST00000404015 867 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 MTCO3P12-201ENST00000416718 547 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 RPL36AP53-201ENST00000432891 316 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 AC104651.2-201ENST00000447549 528 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 SCARNA10-201ENST00000459255 330 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 AC026979.1-201ENST00000492525 396 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 AC015795.1-201ENST00000513669 327 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 RNU6-27P-201ENST00000516146 107 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 RNA5SP464-201ENST00000516251 108 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 IGKV2D-36-201ENST00000518643 226 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 AC107918.3-201ENST00000533272 382 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 AC078814.3-201ENST00000553036 491 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 AC105129.1-201ENST00000560250 297 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 AC037471.2-201ENST00000564941 598 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 MIR4277-201ENST00000578298 84 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 KC877982.1-201ENST00000602313 470 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 AL050343.2-201ENST00000607338 280 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 AL122125.1-201ENST00000616999 600 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 AC233309.1-201ENST00000619522 751 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 AC005858.4-201ENST00000623191 700 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 AC108751.5-201ENST00000492880 1336 ntBASIC4.38□□□□□ -1.71
NDC1Q9BTX1 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NDC1Q9BTX1 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.37□□□□□ -1.71
NDC1Q9BTX1 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NDC1Q9BTX1 AL359893.1-201ENST00000447628 1580 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NDC1Q9BTX1 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NDC1Q9BTX1 RNU1-83P-201ENST00000363426 164 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 Y_RNA.166-201ENST00000363730 102 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.37□□□□□ -1.71
NDC1Q9BTX1 RNU6-339P-201ENST00000384310 107 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 MT-TC-201ENST00000387405 66 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 AL356967.1-201ENST00000406305 431 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.37□□□□□ -1.71
NDC1Q9BTX1 RPS12P10-201ENST00000427031 377 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 AC093156.1-201ENST00000440382 670 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 AC140076.1-201ENST00000449897 361 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.37□□□□□ -1.71
NDC1Q9BTX1 CACYBPP2-201ENST00000453625 678 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 SNORD121B-201ENST00000458838 81 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 AC233702.1-201ENST00000482905 502 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.37□□□□□ -1.71
NDC1Q9BTX1 AL139099.1-201ENST00000497398 403 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.37□□□□□ -1.71
NDC1Q9BTX1 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.37□□□□□ -1.71
NDC1Q9BTX1 SCARNA24.1-201ENST00000516465 137 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 OR4R1P-201ENST00000529879 463 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 HPRT1P3-201ENST00000539521 576 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 OR4T1P-201ENST00000554933 911 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 PARP1P2-201ENST00000556806 195 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 AC084783.1-201ENST00000565846 910 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.37□□□□□ -1.71
NDC1Q9BTX1 AC098848.2-201ENST00000588023 330 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 AL451044.1-201ENST00000604867 238 ntBASIC4.37□□□□□ -1.71
NDC1Q9BTX1 AL354950.2-201ENST00000617939 290 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms