Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.21□□□□□ -1.41
PHOX2BQ99453 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
PHOX2BQ99453 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.21□□□□□ -1.42
PHOX2BQ99453 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PHOX2BQ99453 TNPO1P2-201ENST00000426249 2665 ntBASIC6.21□□□□□ -1.42
PHOX2BQ99453 RNA5SP46-201ENST00000362370 120 ntBASIC6.21□□□□□ -1.42
PHOX2BQ99453 snoU2_19.2-201ENST00000363024 80 ntBASIC6.21□□□□□ -1.42
PHOX2BQ99453 MIR541-201ENST00000401360 84 ntBASIC6.21□□□□□ -1.42
PHOX2BQ99453 VTI1BP4-201ENST00000427516 527 ntBASIC6.21□□□□□ -1.42
PHOX2BQ99453 MTND3P9-201ENST00000429526 346 ntBASIC6.21□□□□□ -1.42
PHOX2BQ99453 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC6.21□□□□□ -1.42
PHOX2BQ99453 ISCUP1-201ENST00000454451 448 ntBASIC6.21□□□□□ -1.42
PHOX2BQ99453 RPL7AP6-201ENST00000477943 801 ntBASIC6.21□□□□□ -1.42
PHOX2BQ99453 RN7SL382P-201ENST00000482631 282 ntBASIC6.21□□□□□ -1.42
PHOX2BQ99453 RNU6-1315P-201ENST00000517187 99 ntBASIC6.21□□□□□ -1.42
PHOX2BQ99453 AP002770.2-201ENST00000543613 532 ntBASIC6.21□□□□□ -1.42
PHOX2BQ99453 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC6.21□□□□□ -1.42
PHOX2BQ99453 SNORA70D-201ENST00000578836 135 ntBASIC6.21□□□□□ -1.42
PHOX2BQ99453 Y_RNA.772-201ENST00000606692 102 ntBASIC6.21□□□□□ -1.42
PHOX2BQ99453 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
PHOX2BQ99453 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.21□□□□□ -1.42
PHOX2BQ99453 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PHOX2BQ99453 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PHOX2BQ99453 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PHOX2BQ99453 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.21□□□□□ -1.42
PHOX2BQ99453 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PHOX2BQ99453 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PHOX2BQ99453 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PHOX2BQ99453 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.21□□□□□ -1.42
PHOX2BQ99453 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PHOX2BQ99453 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PHOX2BQ99453 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PHOX2BQ99453 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PHOX2BQ99453 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
PHOX2BQ99453 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.2□□□□□ -1.42
PHOX2BQ99453 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PHOX2BQ99453 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PHOX2BQ99453 RNU6-1249P-201ENST00000363237 111 ntBASIC6.2□□□□□ -1.42
PHOX2BQ99453 Y_RNA.269-201ENST00000364685 89 ntBASIC6.2□□□□□ -1.42
PHOX2BQ99453 SNORD113-1-201ENST00000365321 69 ntBASIC6.2□□□□□ -1.42
PHOX2BQ99453 SNORA70H-201ENST00000383910 135 ntBASIC6.2□□□□□ -1.42
PHOX2BQ99453 SNORA70J-201ENST00000384182 135 ntBASIC6.2□□□□□ -1.42
PHOX2BQ99453 SNORA70.9-201ENST00000384370 135 ntBASIC6.2□□□□□ -1.42
PHOX2BQ99453 MIR215-201ENST00000384858 110 ntBASIC6.2□□□□□ -1.42
PHOX2BQ99453 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PHOX2BQ99453 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PHOX2BQ99453 AL133482.1-201ENST00000415988 498 ntBASIC6.2□□□□□ -1.42
PHOX2BQ99453 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PHOX2BQ99453 AL354766.1-201ENST00000423396 542 ntBASIC6.2□□□□□ -1.42
PHOX2BQ99453 AL662874.1-201ENST00000426065 230 ntBASIC6.2□□□□□ -1.42
PHOX2BQ99453 AC091286.1-201ENST00000431233 461 ntBASIC6.2□□□□□ -1.42
PHOX2BQ99453 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.2□□□□□ -1.42
PHOX2BQ99453 EIF4A1P11-201ENST00000451239 222 ntBASIC6.2□□□□□ -1.42
PHOX2BQ99453 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.2□□□□□ -1.42
PHOX2BQ99453 OR2AO1P-201ENST00000476497 403 ntBASIC6.2□□□□□ -1.42
PHOX2BQ99453 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PHOX2BQ99453 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC6.2□□□□□ -1.42
PHOX2BQ99453 RN7SKP234-201ENST00000517173 224 ntBASIC6.2□□□□□ -1.42
PHOX2BQ99453 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.2□□□□□ -1.42
PHOX2BQ99453 MIR4300-201ENST00000581016 96 ntBASIC6.2□□□□□ -1.42
PHOX2BQ99453 AC131009.3-201ENST00000621809 287 ntBASIC6.2□□□□□ -1.42
PHOX2BQ99453 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.2□□□□□ -1.42
PHOX2BQ99453 AC010168.2-201ENST00000562691 5428 ntBASIC6.2□□□□□ -1.42
PHOX2BQ99453 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PHOX2BQ99453 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PHOX2BQ99453 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
PHOX2BQ99453 Z95114.1-201ENST00000624264 14574 ntBASIC6.2□□□□□ -1.42
PHOX2BQ99453 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PHOX2BQ99453 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PHOX2BQ99453 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
PHOX2BQ99453 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PHOX2BQ99453 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PHOX2BQ99453 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PHOX2BQ99453 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
PHOX2BQ99453 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PHOX2BQ99453 SDAD1P2-201ENST00000441308 2028 ntBASIC6.2□□□□□ -1.42
PHOX2BQ99453 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PHOX2BQ99453 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PHOX2BQ99453 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PHOX2BQ99453 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PHOX2BQ99453 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PHOX2BQ99453 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
PHOX2BQ99453 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PHOX2BQ99453 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PHOX2BQ99453 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PHOX2BQ99453 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PHOX2BQ99453 AC009643.2-201ENST00000603543 1448 ntBASIC6.19□□□□□ -1.42
PHOX2BQ99453 CARF-208ENST00000428585 2513 ntTSL 2 BASIC6.19□□□□□ -1.42
PHOX2BQ99453 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PHOX2BQ99453 Y_RNA.199-201ENST00000364014 102 ntBASIC6.19□□□□□ -1.42
PHOX2BQ99453 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PHOX2BQ99453 AL645733.1-201ENST00000402250 217 ntBASIC6.19□□□□□ -1.42
PHOX2BQ99453 RNU6-712P-201ENST00000410558 100 ntBASIC6.19□□□□□ -1.42
PHOX2BQ99453 RNU4-78P-201ENST00000410940 126 ntBASIC6.19□□□□□ -1.42
PHOX2BQ99453 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC6.19□□□□□ -1.42
PHOX2BQ99453 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC6.19□□□□□ -1.42
PHOX2BQ99453 SSXP9-201ENST00000417503 292 ntBASIC6.19□□□□□ -1.42
PHOX2BQ99453 AC093414.1-201ENST00000434712 514 ntBASIC6.19□□□□□ -1.42
PHOX2BQ99453 RANP8-201ENST00000444720 713 ntBASIC6.19□□□□□ -1.42
PHOX2BQ99453 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms