Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MRPS31P2-201ENST00000451581 518 ntBASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 CEACAMP6-201ENST00000452007 574 ntBASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 RNU6-333P-201ENST00000459117 107 ntBASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 PTP4A1P6-201ENST00000531034 478 ntBASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 AC068993.1-201ENST00000546724 589 ntBASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 MIR4715-201ENST00000584117 79 ntBASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 AC105224.1-201ENST00000587055 421 ntBASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 7SK.7-201ENST00000603504 247 ntBASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 RNU6-552P-201ENST00000362869 119 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 Y_RNA.234-201ENST00000364409 97 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 Y_RNA.414-201ENST00000384011 101 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 AL357515.1-201ENST00000402967 542 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 RPL23AP1-201ENST00000428990 471 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 RPS3AP52-201ENST00000435639 297 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 PRPS1P1-201ENST00000445305 876 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 NANOGP10-201ENST00000453325 895 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 RPL30P15-201ENST00000457129 321 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 AC006511.1-201ENST00000470614 315 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 AL136126.1-201ENST00000473603 402 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 RNA5SP464-201ENST00000516251 108 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 RN7SKP219-201ENST00000516825 296 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 AC110588.1-201ENST00000559699 137 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 AC090615.1-201ENST00000577519 154 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 AC022726.1-201ENST00000587475 207 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 AC113194.1-201ENST00000606037 500 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 AC005014.2-201ENST00000607795 599 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 MIR6075-201ENST00000620782 95 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 AC011460.1-201ENST00000636268 1834 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 MTND4P14-201ENST00000435799 1354 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 AC097714.1-201ENST00000511272 1647 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 AC009951.1-201ENST00000623674 2614 ntBASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SYNGAP1Q96PV0 SNORA73.1-201ENST00000363107 205 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 SNORD113.2-201ENST00000364166 89 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 Y_RNA.333-201ENST00000365274 102 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 MIR129-1-201ENST00000384972 72 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 MIR670-201ENST00000390142 98 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 MIR454-201ENST00000390180 115 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 AL359634.1-202ENST00000404721 284 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 CTSL3P-202ENST00000412179 788 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 RPL37P10-201ENST00000412884 288 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 AC074085.1-201ENST00000413598 418 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 OR6C66P-201ENST00000414917 930 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 AL358176.2-201ENST00000425769 204 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 RPL32P28-201ENST00000443577 397 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 ARL2BPP10-201ENST00000446487 531 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 RNU7-182P-201ENST00000459009 62 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 RPL7L1P8-201ENST00000469911 741 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 AC126389.1-201ENST00000477436 290 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 AC093767.1-201ENST00000504523 156 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 SNORA67.7-201ENST00000516664 135 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 AC011979.2-201ENST00000527568 352 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 OR5BN1P-201ENST00000532955 829 ntBASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.49□□□□□ -1.53
SYNGAP1Q96PV0 APOOP3-201ENST00000536787 586 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms