Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 AC109471.1-201ENST00000511631 612 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 RNU5A-7P-201ENST00000515979 116 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
COL21A1Q96P44 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 OR5G4P-201ENST00000525251 760 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 AC019227.1-201ENST00000526902 510 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 AC023043.3-201ENST00000593113 385 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 AL109653.1-201ENST00000603091 248 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 XIAPP1-201ENST00000603162 600 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 AC084824.5-201ENST00000612009 413 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
COL21A1Q96P44 AL110115.1-201ENST00000614396 364 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 AL355810.1-201ENST00000614629 552 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 AC139713.2-210ENST00000641741 992 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
COL21A1Q96P44 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
COL21A1Q96P44 AC000403.1-201ENST00000613696 3585 ntBASIC2.76□□□□□ -1.97
COL21A1Q96P44 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.76□□□□□ -1.97
COL21A1Q96P44 AC111188.2-201ENST00000529697 1387 ntBASIC2.75□□□□□ -1.97
COL21A1Q96P44 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.75□□□□□ -1.97
COL21A1Q96P44 AL645568.2-201ENST00000432815 1337 ntBASIC2.75□□□□□ -1.97
COL21A1Q96P44 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
COL21A1Q96P44 AC233263.6-201ENST00000631132 1963 ntBASIC2.75□□□□□ -1.97
COL21A1Q96P44 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL21A1Q96P44 AL590004.2-201ENST00000404787 371 ntBASIC2.75□□□□□ -1.97
COL21A1Q96P44 AL591034.1-201ENST00000407447 340 ntBASIC2.75□□□□□ -1.97
COL21A1Q96P44 U3.42-201ENST00000408746 214 ntBASIC2.75□□□□□ -1.97
COL21A1Q96P44 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.75□□□□□ -1.97
COL21A1Q96P44 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.75□□□□□ -1.97
COL21A1Q96P44 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.75□□□□□ -1.97
COL21A1Q96P44 RPL31P54-201ENST00000429803 370 ntBASIC2.75□□□□□ -1.97
COL21A1Q96P44 MUPP-201ENST00000438111 566 ntBASIC2.75□□□□□ -1.97
COL21A1Q96P44 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.75□□□□□ -1.97
COL21A1Q96P44 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.75□□□□□ -1.97
COL21A1Q96P44 AL136126.1-201ENST00000473603 402 ntBASIC2.75□□□□□ -1.97
COL21A1Q96P44 AC104986.1-201ENST00000517978 436 ntBASIC2.75□□□□□ -1.97
COL21A1Q96P44 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
COL21A1Q96P44 AC107016.2-201ENST00000547968 190 ntBASIC2.75□□□□□ -1.97
COL21A1Q96P44 AP005205.1-201ENST00000563503 508 ntBASIC2.75□□□□□ -1.97
COL21A1Q96P44 AC087481.2-201ENST00000565492 330 ntBASIC2.75□□□□□ -1.97
COL21A1Q96P44 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.75□□□□□ -1.97
COL21A1Q96P44 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.75□□□□□ -1.97
COL21A1Q96P44 VN1R87P-201ENST00000596706 487 ntBASIC2.75□□□□□ -1.97
COL21A1Q96P44 RPL23AP92-201ENST00000603609 255 ntBASIC2.75□□□□□ -1.97
COL21A1Q96P44 AC120053.1-201ENST00000607706 736 ntBASIC2.75□□□□□ -1.97
COL21A1Q96P44 AC131902.3-201ENST00000611767 581 ntBASIC2.75□□□□□ -1.97
COL21A1Q96P44 VN1R7P-201ENST00000619242 903 ntBASIC2.75□□□□□ -1.97
COL21A1Q96P44 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.75□□□□□ -1.97
COL21A1Q96P44 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL21A1Q96P44 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL21A1Q96P44 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.75□□□□□ -1.97
COL21A1Q96P44 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
COL21A1Q96P44 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL21A1Q96P44 RNU1-140P-201ENST00000365040 165 ntBASIC2.74□□□□□ -1.97
COL21A1Q96P44 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
COL21A1Q96P44 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.74□□□□□ -1.97
COL21A1Q96P44 RPL7P44-201ENST00000424827 742 ntBASIC2.74□□□□□ -1.97
COL21A1Q96P44 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.74□□□□□ -1.97
COL21A1Q96P44 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.74□□□□□ -1.97
COL21A1Q96P44 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.74□□□□□ -1.97
COL21A1Q96P44 RPS29P6-201ENST00000438196 145 ntBASIC2.74□□□□□ -1.97
COL21A1Q96P44 AC112492.1-201ENST00000449607 712 ntBASIC2.74□□□□□ -1.97
COL21A1Q96P44 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.74□□□□□ -1.97
COL21A1Q96P44 AC084024.2-201ENST00000503480 791 ntBASIC2.74□□□□□ -1.97
COL21A1Q96P44 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.74□□□□□ -1.97
COL21A1Q96P44 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.74□□□□□ -1.97
COL21A1Q96P44 SNORA31.8-201ENST00000516327 108 ntBASIC2.74□□□□□ -1.97
COL21A1Q96P44 RNU6-885P-201ENST00000516607 104 ntBASIC2.74□□□□□ -1.97
COL21A1Q96P44 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.74□□□□□ -1.97
COL21A1Q96P44 AP001317.1-201ENST00000531194 960 ntBASIC2.74□□□□□ -1.97
COL21A1Q96P44 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
COL21A1Q96P44 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.74□□□□□ -1.97
COL21A1Q96P44 AC034105.3-201ENST00000565294 442 ntBASIC2.74□□□□□ -1.97
COL21A1Q96P44 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.74□□□□□ -1.97
COL21A1Q96P44 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.74□□□□□ -1.97
COL21A1Q96P44 AL020991.1-201ENST00000612314 373 ntBASIC2.74□□□□□ -1.97
COL21A1Q96P44 AC018926.1-201ENST00000616335 435 ntBASIC2.74□□□□□ -1.97
COL21A1Q96P44 CYCSP41-201ENST00000616920 296 ntBASIC2.74□□□□□ -1.97
COL21A1Q96P44 AP000943.4-201ENST00000622912 357 ntBASIC2.74□□□□□ -1.97
COL21A1Q96P44 AC009039.2-201ENST00000624524 529 ntBASIC2.74□□□□□ -1.97
COL21A1Q96P44 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL21A1Q96P44 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.74□□□□□ -1.97
COL21A1Q96P44 AC092447.7-201ENST00000422212 1621 ntBASIC2.74□□□□□ -1.97
COL21A1Q96P44 AL365361.1-201ENST00000566942 3481 ntBASIC2.74□□□□□ -1.97
COL21A1Q96P44 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
COL21A1Q96P44 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.73□□□□□ -1.97
COL21A1Q96P44 AC103988.1-201ENST00000566382 2177 ntBASIC2.73□□□□□ -1.97
COL21A1Q96P44 NACA3P-201ENST00000359690 648 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms