Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 SNORD116-14-201ENST00000383894 92 ntBASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 SNORD116-17-201ENST00000383929 92 ntBASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 SNORD116-15-201ENST00000384445 92 ntBASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 SNORD116-20-201ENST00000384529 92 ntBASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 SNORD116-19-201ENST00000384729 92 ntBASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 AC005042.1-201ENST00000393397 800 ntBASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 RNU2-43P-201ENST00000410306 190 ntBASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 AL592148.1-201ENST00000413568 445 ntBASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 AC024067.1-201ENST00000426199 223 ntBASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 RPS12P17-201ENST00000438591 377 ntBASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 HIGD1AP2-201ENST00000446367 280 ntBASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 RN7SL172P-201ENST00000460535 303 ntBASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 RN7SL583P-201ENST00000475692 287 ntBASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 APOOP4-201ENST00000513530 597 ntBASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 HIGD1AP3-201ENST00000515857 278 ntBASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 IGKV2D-36-201ENST00000518643 226 ntBASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 AC107294.1-201ENST00000609524 467 ntBASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 Clostridiales-1.2-201ENST00000636724 160 ntBASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 AC073869.8-201ENST00000641806 335 ntBASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
MS4A4AQ96JQ5 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 AC079753.1-201ENST00000623243 3868 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 MIR412-201ENST00000362142 91 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 Y_RNA.123-201ENST00000363338 102 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 RNU4-84P-201ENST00000364200 139 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 MIR223-201ENST00000385204 110 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 MIR569-201ENST00000385228 96 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 AL133270.1-201ENST00000402635 279 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 MIR1250-201ENST00000408098 113 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 RN7SKP125-201ENST00000410481 302 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 AC113412.1-201ENST00000425840 504 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 LAMTOR3P1-201ENST00000428620 370 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 AL592045.1-201ENST00000429867 352 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 CR769767.1-201ENST00000436337 346 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 RPS15AP7-201ENST00000439294 405 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 RN7SL860P-201ENST00000473738 223 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 RPL23AP45-201ENST00000476406 468 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 SUMO2P6-201ENST00000505273 288 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 GMPSP1-201ENST00000514075 579 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 TXNP4-201ENST00000575018 310 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 AC008749.1-201ENST00000597650 306 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 AL139395.1-201ENST00000603662 160 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 RPSAP73-201ENST00000614820 330 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 AC007938.2-201ENST00000604666 2634 ntBASIC6.8□□□□□ -1.32
MS4A4AQ96JQ5 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
MS4A4AQ96JQ5 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MS4A4AQ96JQ5 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MS4A4AQ96JQ5 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
MS4A4AQ96JQ5 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
MS4A4AQ96JQ5 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
MS4A4AQ96JQ5 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.79□□□□□ -1.32
MS4A4AQ96JQ5 AP003119.3-201ENST00000566747 4192 ntBASIC6.79□□□□□ -1.32
MS4A4AQ96JQ5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MS4A4AQ96JQ5 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
MS4A4AQ96JQ5 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
MS4A4AQ96JQ5 RNU6-879P-201ENST00000364328 108 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms