Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 PISRT1-201ENST00000626175 531 ntBASIC3.72□□□□□ -1.81
RAB40AQ8WXH6 AL392088.2-201ENST00000637607 285 ntBASIC3.72□□□□□ -1.81
RAB40AQ8WXH6 TAB3P1-202ENST00000452645 1634 ntBASIC3.72□□□□□ -1.81
RAB40AQ8WXH6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RAB40AQ8WXH6 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RAB40AQ8WXH6 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RAB40AQ8WXH6 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RAB40AQ8WXH6 MARK2P15-201ENST00000432204 2186 ntBASIC3.72□□□□□ -1.81
RAB40AQ8WXH6 DDX10P1-201ENST00000448545 1933 ntBASIC3.72□□□□□ -1.81
RAB40AQ8WXH6 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.71□□□□□ -1.81
RAB40AQ8WXH6 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 USP8P1-201ENST00000494673 3183 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AC007685.1-201ENST00000329806 452 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 U8.3-201ENST00000363321 132 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 RNA5SP509-201ENST00000364577 119 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 RNY4P16-201ENST00000364768 94 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 MIR3065-201ENST00000390137 79 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 RNU6-278P-201ENST00000390945 109 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AC097374.1-203ENST00000400783 485 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 TMSB10P2-201ENST00000416049 131 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 C1DP2-201ENST00000418167 426 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 MTCO1P39-201ENST00000426148 480 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 USP9YP14-201ENST00000430663 563 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 RPS24P1-201ENST00000438550 371 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AL356535.1-201ENST00000440335 398 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 RABEPKP1-201ENST00000440529 1026 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AC011276.1-201ENST00000469688 323 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AC104164.2-201ENST00000496953 495 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 FTH1P21-201ENST00000512179 511 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 RNU2-46P-201ENST00000517038 113 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AC107934.1-201ENST00000522215 217 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AP003392.2-201ENST00000527269 208 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 DEFB108A-201ENST00000530110 222 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AC105233.3-201ENST00000531125 744 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 SNRPGP16-201ENST00000533275 226 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 TOMM20P2-201ENST00000540082 421 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 CBX3P5-201ENST00000552017 521 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AC068831.4-201ENST00000556118 109 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 MIR3118-1-201ENST00000581787 76 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 MIR4697-201ENST00000582977 78 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AC078795.2-201ENST00000602835 1252 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AC025946.2-201ENST00000603398 234 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AC091805.2-201ENST00000603848 235 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 NDUFA8P1-201ENST00000605525 367 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AC098614.4-201ENST00000607601 462 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AC128687.2-201ENST00000609657 566 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AC122108.2-201ENST00000611946 526 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AC064801.1-201ENST00000612025 407 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AC091304.9-201ENST00000612091 226 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AC093838.1-201ENST00000613014 469 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 AL713922.2-201ENST00000619384 716 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 MIR6758-201ENST00000620653 63 ntBASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.71□□□□□ -1.82
RAB40AQ8WXH6 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 AC106871.1-201ENST00000568324 3102 ntBASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 AC126755.2-208ENST00000327792 462 ntBASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 AC138969.1-213ENST00000331436 462 ntBASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 RNU6-223P-201ENST00000362830 107 ntBASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 RNU5E-8P-201ENST00000363502 116 ntBASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 RNU4-25P-201ENST00000410569 230 ntBASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 RPL7AP73-201ENST00000413490 353 ntBASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 ATP5HP2-201ENST00000433885 485 ntBASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 AC119618.1-201ENST00000434191 222 ntBASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 AC090774.1-201ENST00000435925 246 ntBASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 ARPC3P1-201ENST00000437218 533 ntBASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 AL138799.3-201ENST00000438968 350 ntBASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.7□□□□□ -1.82
RAB40AQ8WXH6 RPL21P89-201ENST00000444021 467 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms