Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 RN7SL807P-201ENST00000470923 297 ntBASIC4.21□□□□□ -1.74
USP38Q8NB14 RPL32P34-201ENST00000486380 400 ntBASIC4.21□□□□□ -1.74
USP38Q8NB14 AC024589.1-201ENST00000512207 263 ntBASIC4.21□□□□□ -1.74
USP38Q8NB14 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.21□□□□□ -1.74
USP38Q8NB14 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.21□□□□□ -1.74
USP38Q8NB14 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.21□□□□□ -1.74
USP38Q8NB14 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.21□□□□□ -1.74
USP38Q8NB14 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.21□□□□□ -1.74
USP38Q8NB14 EIF4BP1-201ENST00000554881 351 ntBASIC4.21□□□□□ -1.74
USP38Q8NB14 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.21□□□□□ -1.74
USP38Q8NB14 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.21□□□□□ -1.74
USP38Q8NB14 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.21□□□□□ -1.74
USP38Q8NB14 AC009101.1-201ENST00000568135 242 ntBASIC4.21□□□□□ -1.74
USP38Q8NB14 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.21□□□□□ -1.74
USP38Q8NB14 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.21□□□□□ -1.74
USP38Q8NB14 MTCYBP22-201ENST00000603788 447 ntBASIC4.21□□□□□ -1.74
USP38Q8NB14 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.21□□□□□ -1.74
USP38Q8NB14 AC097065.2-201ENST00000608159 533 ntBASIC4.21□□□□□ -1.74
USP38Q8NB14 AC012531.5-201ENST00000611375 151 ntBASIC4.21□□□□□ -1.74
USP38Q8NB14 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
USP38Q8NB14 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USP38Q8NB14 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USP38Q8NB14 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USP38Q8NB14 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.21□□□□□ -1.74
USP38Q8NB14 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USP38Q8NB14 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
USP38Q8NB14 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USP38Q8NB14 AC012321.1-201ENST00000561622 1588 ntBASIC4.2□□□□□ -1.74
USP38Q8NB14 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.2□□□□□ -1.74
USP38Q8NB14 AL445523.1-201ENST00000451184 1362 ntBASIC4.2□□□□□ -1.74
USP38Q8NB14 RNU6-1249P-201ENST00000363237 111 ntBASIC4.2□□□□□ -1.74
USP38Q8NB14 RNU5F-7P-201ENST00000363696 115 ntBASIC4.2□□□□□ -1.74
USP38Q8NB14 RNU6-301P-201ENST00000384277 107 ntBASIC4.2□□□□□ -1.74
USP38Q8NB14 SNORA48.5-201ENST00000391143 135 ntBASIC4.2□□□□□ -1.74
USP38Q8NB14 AL031577.2-201ENST00000404133 280 ntBASIC4.2□□□□□ -1.74
USP38Q8NB14 AC092447.6-201ENST00000414578 210 ntBASIC4.2□□□□□ -1.74
USP38Q8NB14 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.2□□□□□ -1.74
USP38Q8NB14 AC092641.1-201ENST00000440229 772 ntBASIC4.2□□□□□ -1.74
USP38Q8NB14 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.2□□□□□ -1.74
USP38Q8NB14 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.2□□□□□ -1.74
USP38Q8NB14 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.2□□□□□ -1.74
USP38Q8NB14 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.2□□□□□ -1.74
USP38Q8NB14 RPL30P9-201ENST00000465586 330 ntBASIC4.2□□□□□ -1.74
USP38Q8NB14 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.2□□□□□ -1.74
USP38Q8NB14 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USP38Q8NB14 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.2□□□□□ -1.74
USP38Q8NB14 COX7A2P2-201ENST00000505291 250 ntBASIC4.2□□□□□ -1.74
USP38Q8NB14 AC034159.1-201ENST00000513885 583 ntBASIC4.2□□□□□ -1.74
USP38Q8NB14 RN7SKP18-201ENST00000516005 275 ntBASIC4.2□□□□□ -1.74
USP38Q8NB14 COX6CP8-201ENST00000522620 226 ntBASIC4.2□□□□□ -1.74
USP38Q8NB14 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USP38Q8NB14 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.2□□□□□ -1.74
USP38Q8NB14 EEF1B2P4-201ENST00000551398 348 ntBASIC4.2□□□□□ -1.74
USP38Q8NB14 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.2□□□□□ -1.74
USP38Q8NB14 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.2□□□□□ -1.74
USP38Q8NB14 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.2□□□□□ -1.74
USP38Q8NB14 AC090186.1-201ENST00000605991 572 ntBASIC4.2□□□□□ -1.74
USP38Q8NB14 AC135507.2-201ENST00000612443 309 ntBASIC4.2□□□□□ -1.74
USP38Q8NB14 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.2□□□□□ -1.74
USP38Q8NB14 AL450472.3-201ENST00000615578 367 ntBASIC4.2□□□□□ -1.74
USP38Q8NB14 AL357080.1-201ENST00000617394 239 ntBASIC4.2□□□□□ -1.74
USP38Q8NB14 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
USP38Q8NB14 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USP38Q8NB14 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
USP38Q8NB14 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.19□□□□□ -1.74
USP38Q8NB14 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
USP38Q8NB14 RNA5SP258-201ENST00000362750 119 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 RNU6-343P-201ENST00000364709 104 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 RNA5SP51-201ENST00000364750 119 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
USP38Q8NB14 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
USP38Q8NB14 RPS3AP26-201ENST00000398259 784 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 AL021407.1-201ENST00000404531 386 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 MIR1302-8-201ENST00000408342 128 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 RNA5SP120-201ENST00000410900 112 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
USP38Q8NB14 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.19□□□□□ -1.74
USP38Q8NB14 AIMP1P1-201ENST00000418670 937 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.19□□□□□ -1.74
USP38Q8NB14 AL513174.1-201ENST00000423182 629 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 MRPS18BP2-201ENST00000434310 759 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 Z74696.2-201ENST00000436514 498 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 MUPP-201ENST00000438111 566 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.19□□□□□ -1.74
USP38Q8NB14 RPL21P23-201ENST00000446654 460 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 CEACAMP4-201ENST00000457676 421 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 HMGB1P36-201ENST00000487709 576 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 AP001086.1-201ENST00000494882 321 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.19□□□□□ -1.74
USP38Q8NB14 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.19□□□□□ -1.74
USP38Q8NB14 AC087276.1-201ENST00000529659 480 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.19□□□□□ -1.74
USP38Q8NB14 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.19□□□□□ -1.74
USP38Q8NB14 AC013828.2-201ENST00000532487 235 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.19□□□□□ -1.74
USP38Q8NB14 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.19□□□□□ -1.74
USP38Q8NB14 AC136618.2-201ENST00000575091 400 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.19□□□□□ -1.74
USP38Q8NB14 AC110741.2-201ENST00000605278 268 ntBASIC4.19□□□□□ -1.74
USP38Q8NB14 OR2AS2P-201ENST00000606902 342 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms