Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.93□□□□□ -1.94
VPS8Q8N3P4 AC068790.3-201ENST00000602988 553 ntBASIC2.93□□□□□ -1.94
VPS8Q8N3P4 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS8Q8N3P4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.92□□□□□ -1.94
VPS8Q8N3P4 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.92□□□□□ -1.94
VPS8Q8N3P4 AC002543.1-201ENST00000299783 1954 ntBASIC2.92□□□□□ -1.94
VPS8Q8N3P4 MIR583-201ENST00000384846 75 ntBASIC2.92□□□□□ -1.94
VPS8Q8N3P4 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS8Q8N3P4 HMGB1P48-201ENST00000446155 598 ntBASIC2.92□□□□□ -1.94
VPS8Q8N3P4 AL031659.1-201ENST00000447075 539 ntBASIC2.92□□□□□ -1.94
VPS8Q8N3P4 RNU6-1218P-201ENST00000458990 108 ntBASIC2.92□□□□□ -1.94
VPS8Q8N3P4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS8Q8N3P4 AC079804.2-201ENST00000490376 200 ntBASIC2.92□□□□□ -1.94
VPS8Q8N3P4 RNA5SP182-201ENST00000516064 82 ntBASIC2.92□□□□□ -1.94
VPS8Q8N3P4 RN7SKP244-201ENST00000516513 307 ntBASIC2.92□□□□□ -1.94
VPS8Q8N3P4 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.92□□□□□ -1.94
VPS8Q8N3P4 AADACP1-206ENST00000561502 1193 ntBASIC2.92□□□□□ -1.94
VPS8Q8N3P4 AC093673.2-201ENST00000609674 331 ntBASIC2.92□□□□□ -1.94
VPS8Q8N3P4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
VPS8Q8N3P4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS8Q8N3P4 AC011460.1-201ENST00000636268 1834 ntBASIC2.91□□□□□ -1.94
VPS8Q8N3P4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VPS8Q8N3P4 MIR1294-201ENST00000408503 142 ntBASIC2.91□□□□□ -1.94
VPS8Q8N3P4 EIF1AXP1-201ENST00000419267 435 ntBASIC2.91□□□□□ -1.94
VPS8Q8N3P4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.91□□□□□ -1.94
VPS8Q8N3P4 AC017007.3-201ENST00000479865 435 ntBASIC2.91□□□□□ -1.94
VPS8Q8N3P4 ARL4AP2-201ENST00000507378 601 ntBASIC2.91□□□□□ -1.94
VPS8Q8N3P4 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.91□□□□□ -1.94
VPS8Q8N3P4 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.91□□□□□ -1.94
VPS8Q8N3P4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VPS8Q8N3P4 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
VPS8Q8N3P4 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VPS8Q8N3P4 MIR92A2-201ENST00000385299 75 ntBASIC2.9□□□□□ -1.95
VPS8Q8N3P4 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
VPS8Q8N3P4 PRELID3BP11-201ENST00000414230 479 ntBASIC2.9□□□□□ -1.95
VPS8Q8N3P4 ELOCP6-201ENST00000429066 328 ntBASIC2.9□□□□□ -1.95
VPS8Q8N3P4 HMGN2P20-201ENST00000437531 273 ntBASIC2.9□□□□□ -1.95
VPS8Q8N3P4 RPS15AP1-201ENST00000457423 391 ntBASIC2.9□□□□□ -1.95
VPS8Q8N3P4 ELOCP12-201ENST00000458706 328 ntBASIC2.9□□□□□ -1.95
VPS8Q8N3P4 RPL23AP42-201ENST00000471152 471 ntBASIC2.9□□□□□ -1.95
VPS8Q8N3P4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.9□□□□□ -1.95
VPS8Q8N3P4 AC090695.1-201ENST00000561269 1222 ntBASIC2.9□□□□□ -1.95
VPS8Q8N3P4 AC092159.4-201ENST00000624944 550 ntBASIC2.9□□□□□ -1.95
VPS8Q8N3P4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VPS8Q8N3P4 AC240504.1-201ENST00000395709 845 ntBASIC2.89□□□□□ -1.95
VPS8Q8N3P4 HMGB3P2-201ENST00000411913 584 ntBASIC2.89□□□□□ -1.95
VPS8Q8N3P4 MTND1P23-201ENST00000416931 372 ntBASIC2.89□□□□□ -1.95
VPS8Q8N3P4 RPL31P45-201ENST00000419532 356 ntBASIC2.89□□□□□ -1.95
VPS8Q8N3P4 AC104308.1-201ENST00000454621 333 ntBASIC2.89□□□□□ -1.95
VPS8Q8N3P4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.89□□□□□ -1.95
VPS8Q8N3P4 RPP40P2-201ENST00000603596 712 ntBASIC2.89□□□□□ -1.95
VPS8Q8N3P4 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VPS8Q8N3P4 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.89□□□□□ -1.95
VPS8Q8N3P4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS8Q8N3P4 AL513331.1-201ENST00000411908 397 ntBASIC2.88□□□□□ -1.95
VPS8Q8N3P4 HMGN2P35-201ENST00000412164 270 ntBASIC2.88□□□□□ -1.95
VPS8Q8N3P4 AL445685.2-201ENST00000422551 342 ntBASIC2.88□□□□□ -1.95
VPS8Q8N3P4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS8Q8N3P4 DPPA3P1-201ENST00000448050 469 ntBASIC2.88□□□□□ -1.95
VPS8Q8N3P4 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VPS8Q8N3P4 RNU1-40P-201ENST00000516816 164 ntBASIC2.88□□□□□ -1.95
VPS8Q8N3P4 RNU1-97P-201ENST00000516872 164 ntBASIC2.88□□□□□ -1.95
VPS8Q8N3P4 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
VPS8Q8N3P4 MTND2P17-201ENST00000550281 688 ntBASIC2.88□□□□□ -1.95
VPS8Q8N3P4 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS8Q8N3P4 AC011494.1-201ENST00000596454 237 ntBASIC2.88□□□□□ -1.95
VPS8Q8N3P4 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.88□□□□□ -1.95
VPS8Q8N3P4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
VPS8Q8N3P4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VPS8Q8N3P4 RPL23AP47-201ENST00000408017 460 ntBASIC2.87□□□□□ -1.95
VPS8Q8N3P4 RPL17P12-201ENST00000413391 526 ntBASIC2.87□□□□□ -1.95
VPS8Q8N3P4 AL121882.1-201ENST00000422893 417 ntBASIC2.87□□□□□ -1.95
VPS8Q8N3P4 RPL7P12-201ENST00000446719 750 ntBASIC2.87□□□□□ -1.95
VPS8Q8N3P4 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS8Q8N3P4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.87□□□□□ -1.95
VPS8Q8N3P4 AC104115.2-201ENST00000523026 687 ntBASIC2.87□□□□□ -1.95
VPS8Q8N3P4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.87□□□□□ -1.95
VPS8Q8N3P4 AC239860.2-201ENST00000525886 270 ntBASIC2.87□□□□□ -1.95
VPS8Q8N3P4 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.87□□□□□ -1.95
VPS8Q8N3P4 AC121761.2-201ENST00000617300 689 ntBASIC2.87□□□□□ -1.95
VPS8Q8N3P4 AC084768.2-201ENST00000622736 221 ntBASIC2.87□□□□□ -1.95
VPS8Q8N3P4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.86□□□□□ -1.95
VPS8Q8N3P4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.86□□□□□ -1.95
VPS8Q8N3P4 HMGN2P21-201ENST00000447764 270 ntBASIC2.86□□□□□ -1.95
VPS8Q8N3P4 AC107393.1-201ENST00000512403 346 ntBASIC2.86□□□□□ -1.95
VPS8Q8N3P4 AC092184.1-201ENST00000625042 715 ntBASIC2.86□□□□□ -1.95
VPS8Q8N3P4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS8Q8N3P4 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VPS8Q8N3P4 AL359893.1-201ENST00000447628 1580 ntBASIC2.86□□□□□ -1.95
VPS8Q8N3P4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VPS8Q8N3P4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.85□□□□□ -1.95
VPS8Q8N3P4 SNORA17.3-201ENST00000391159 129 ntBASIC2.85□□□□□ -1.95
VPS8Q8N3P4 RNU1-101P-201ENST00000391171 127 ntBASIC2.85□□□□□ -1.95
VPS8Q8N3P4 AC019129.1-201ENST00000403786 261 ntBASIC2.85□□□□□ -1.95
VPS8Q8N3P4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS8Q8N3P4 HMGB1P12-201ENST00000438594 598 ntBASIC2.85□□□□□ -1.95
VPS8Q8N3P4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.85□□□□□ -1.95
VPS8Q8N3P4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.85□□□□□ -1.95
VPS8Q8N3P4 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.85□□□□□ -1.95
VPS8Q8N3P4 CKS1BP2-201ENST00000497342 240 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms