Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 PRO1804-201ENST00000623780 2050 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 DBF4P1-201ENST00000412976 1892 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 CDR1-202ENST00000625883 1485 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SYNE4Q8N205 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SYNE4Q8N205 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SYNE4Q8N205 RNU6-492P-201ENST00000363035 104 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 RNY4P14-201ENST00000363656 96 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 Y_RNA.509-201ENST00000384506 99 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 RWDD4P2-201ENST00000426392 563 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 NPM1P24-201ENST00000428039 894 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 AL358934.1-201ENST00000432346 324 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 RPL39P6-201ENST00000448289 150 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 RPS17P13-201ENST00000448974 407 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 RPL23AP15-201ENST00000450202 459 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 MTND1P11-201ENST00000456661 876 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 RPL21P11-201ENST00000461458 483 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 MTCYBP18-201ENST00000501056 747 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 AC009646.1-201ENST00000510455 318 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 RPL23AP94-201ENST00000512518 302 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SYNE4Q8N205 AC025465.4-201ENST00000513422 638 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 SNORA18.6-201ENST00000516792 115 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 RNU6-1261P-201ENST00000517194 104 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 CYCSP2-201ENST00000558168 301 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 AC141257.3-201ENST00000572906 215 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 AC025449.1-201ENST00000603896 529 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 AC005034.5-201ENST00000604219 466 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 AC008536.2-201ENST00000607284 349 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 AC008250.2-201ENST00000615261 205 ntBASIC4.78□□□□□ -1.64
SYNE4Q8N205 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.78□□□□□ -1.64
SYNE4Q8N205 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SYNE4Q8N205 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SYNE4Q8N205 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
SYNE4Q8N205 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SYNE4Q8N205 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SYNE4Q8N205 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SYNE4Q8N205 RNU6-534P-201ENST00000364877 106 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYNE4Q8N205 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.77□□□□□ -1.65
SYNE4Q8N205 XGY1-201ENST00000381172 446 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 MIR199A2-201ENST00000385289 110 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SYNE4Q8N205 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SYNE4Q8N205 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SYNE4Q8N205 RPS24P12-201ENST00000402084 394 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 MIR1251-201ENST00000408552 70 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 HMGB1P11-201ENST00000413899 637 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 RPS27AP14-201ENST00000422868 454 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 AC012498.1-201ENST00000424037 437 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 SNORA71B-202ENST00000439232 272 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.77□□□□□ -1.65
SYNE4Q8N205 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.77□□□□□ -1.65
SYNE4Q8N205 CYCSP35-201ENST00000451978 304 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 BX510359.1-201ENST00000456973 237 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 RN7SL271P-201ENST00000487601 295 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 RPL31P61-201ENST00000496160 376 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 MTCO2P30-201ENST00000503662 364 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SYNE4Q8N205 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SYNE4Q8N205 RAC1P2-201ENST00000511164 579 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.77□□□□□ -1.65
SYNE4Q8N205 RNU6-358P-201ENST00000516564 75 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 OR5B10P-201ENST00000532869 642 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SYNE4Q8N205 AL138976.2-201ENST00000563989 694 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 AC093519.1-201ENST00000566109 298 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 AC009101.1-201ENST00000568135 242 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.77□□□□□ -1.65
SYNE4Q8N205 MIR5187-201ENST00000583479 76 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 AC044792.1-201ENST00000593294 196 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 AL139286.1-201ENST00000604465 483 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 AC069304.2-201ENST00000605154 435 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.77□□□□□ -1.65
SYNE4Q8N205 AC010338.1-201ENST00000621823 717 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 AC093591.3-201ENST00000634516 308 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.77□□□□□ -1.65
SYNE4Q8N205 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SYNE4Q8N205 MTCO1P14-201ENST00000441695 1559 ntBASIC4.77□□□□□ -1.65
SYNE4Q8N205 AC093775.1-201ENST00000624154 1868 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms