Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 OR5H2-201ENST00000355273 945 ntBASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 SNORD56.5-201ENST00000364281 72 ntBASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 RNU6-1027P-201ENST00000383998 107 ntBASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 AL035405.1-201ENST00000400795 710 ntBASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 AL136133.1-201ENST00000413694 376 ntBASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 RAC1P8-201ENST00000427086 527 ntBASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 AL035410.1-201ENST00000427409 427 ntBASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 ARF4P4-201ENST00000439608 520 ntBASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 Z96811.1-201ENST00000445880 108 ntBASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 NPM1P13-201ENST00000452663 865 ntBASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 MRPL42P4-201ENST00000453267 443 ntBASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 snoU13.24-201ENST00000458998 104 ntBASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 SCARNA13-201ENST00000516672 275 ntBASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 AP003385.6-201ENST00000531603 374 ntBASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 HPRT1P3-201ENST00000539521 576 ntBASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 DNAJC8P1-201ENST00000554535 372 ntBASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 AC090330.1-201ENST00000588646 764 ntBASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 AC099785.1-201ENST00000605697 437 ntBASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 AL355493.4-201ENST00000618530 292 ntBASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC65Q8IXS2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.15□□□□□ -1.9
CCDC65Q8IXS2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC65Q8IXS2 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC65Q8IXS2 GABRG2-229ENST00000641017 3628 ntBASIC3.15□□□□□ -1.9
CCDC65Q8IXS2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 RNA5SP258-201ENST00000362750 119 ntBASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 SNORA70.4-201ENST00000365509 134 ntBASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 AL603865.2-201ENST00000401679 213 ntBASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 EEF1A1P41-201ENST00000414667 207 ntBASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 RPS29P6-201ENST00000438196 145 ntBASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 RPS3AP12-201ENST00000443616 753 ntBASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 UBBP3-201ENST00000445497 241 ntBASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 AC004022.1-201ENST00000447766 1066 ntBASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 NDUFA5P7-201ENST00000452914 242 ntBASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 MTCO3P2-201ENST00000457365 171 ntBASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 S100A11P2-201ENST00000467589 312 ntBASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 AC026427.2-201ENST00000506228 536 ntBASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 snoZ278.1-201ENST00000517059 112 ntBASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 AC023632.1-201ENST00000518463 375 ntBASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 AC019227.1-201ENST00000526902 510 ntBASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 AC122134.1-202ENST00000569111 1201 ntBASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 AC008507.2-201ENST00000588402 1176 ntBASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 AC103881.1-201ENST00000603476 538 ntBASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 AC253576.2-201ENST00000618815 580 ntBASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 AC007275.1-201ENST00000621243 671 ntBASIC3.15□□□□□ -1.91
CCDC65Q8IXS2 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 AC092593.1-201ENST00000515413 1815 ntBASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 AP003122.5-201ENST00000527668 3766 ntBASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 RNA5SP387-201ENST00000364226 106 ntBASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 MIR181A2-201ENST00000384863 110 ntBASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 SNORA48.5-201ENST00000391143 135 ntBASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 BOLA3P4-201ENST00000418151 400 ntBASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 RPL23AP16-201ENST00000441715 421 ntBASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 RPS29P26-201ENST00000477483 171 ntBASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 ARL2BPP5-201ENST00000523141 481 ntBASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 SULT1C2P1-202ENST00000562418 459 ntBASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 AC087481.2-201ENST00000565492 330 ntBASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 VN1R87P-201ENST00000596706 487 ntBASIC3.14□□□□□ -1.91
CCDC65Q8IXS2 GAS5-AS1-201ENST00000602767 694 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms