Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 MTCO3P2-201ENST00000457365 171 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 Y_RNA.639-201ENST00000458981 102 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 SNORD19B-201ENST00000459623 84 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.28□□□□□ -1.72
VRK3Q8IV63 RPL7AP28-201ENST00000464513 571 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.28□□□□□ -1.72
VRK3Q8IV63 AC034222.1-201ENST00000494052 532 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 AC022616.3-201ENST00000523940 148 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 TRAV8-5-201ENST00000537369 341 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VRK3Q8IV63 ELOCP31-201ENST00000540463 467 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.28□□□□□ -1.72
VRK3Q8IV63 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.28□□□□□ -1.72
VRK3Q8IV63 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.28□□□□□ -1.72
VRK3Q8IV63 MAGOH2P-202ENST00000584384 429 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 AL353997.4-201ENST00000586196 166 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.28□□□□□ -1.72
VRK3Q8IV63 AC091979.2-201ENST00000607514 214 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 AL158196.1-201ENST00000616786 434 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 AC007546.1-201ENST00000619452 559 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 AP001005.3-201ENST00000622049 129 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 AC090617.10-201ENST00000624308 134 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.28□□□□□ -1.72
VRK3Q8IV63 AC027228.2-201ENST00000567141 2154 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 KPNA2P2-201ENST00000419546 1489 ntBASIC4.28□□□□□ -1.72
VRK3Q8IV63 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.28□□□□□ -1.72
VRK3Q8IV63 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VRK3Q8IV63 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
VRK3Q8IV63 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.28□□□□□ -1.72
VRK3Q8IV63 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VRK3Q8IV63 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VRK3Q8IV63 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VRK3Q8IV63 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VRK3Q8IV63 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.28□□□□□ -1.72
VRK3Q8IV63 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.28□□□□□ -1.72
VRK3Q8IV63 AC092435.4-201ENST00000623012 4159 ntBASIC4.28□□□□□ -1.73
VRK3Q8IV63 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.28□□□□□ -1.73
VRK3Q8IV63 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VRK3Q8IV63 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VRK3Q8IV63 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VRK3Q8IV63 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VRK3Q8IV63 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VRK3Q8IV63 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 Y_RNA.184-201ENST00000363884 108 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 RNA5SP22-201ENST00000365393 109 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 RNU6-744P-201ENST00000365557 107 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 RNU6-1316P-201ENST00000384242 108 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 RNU6-474P-201ENST00000384243 107 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 RNU6-1160P-201ENST00000384546 104 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 ARF4P3-201ENST00000397387 509 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 AC234782.4-201ENST00000417646 1048 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 DNAJC19P7-201ENST00000428811 344 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 AC236972.2-201ENST00000434979 310 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 BNIP3P2-201ENST00000441221 577 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 BRK1P2-201ENST00000442875 223 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 PHBP16-201ENST00000446318 950 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 RPL23AP15-201ENST00000450202 459 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 RPL23AP24-201ENST00000458203 385 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 RNU6-329P-201ENST00000459618 107 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 RN7SL98P-201ENST00000462271 300 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 RNU6-1314P-201ENST00000517139 104 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 AC107934.1-201ENST00000522215 217 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 PSMA2P1-201ENST00000526365 646 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 MIR4742-201ENST00000581069 85 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 AC006504.6-201ENST00000590142 199 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 AC113403.1-201ENST00000604910 193 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 MIR6748-201ENST00000610433 71 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 AC138305.3-201ENST00000624988 240 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VRK3Q8IV63 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VRK3Q8IV63 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VRK3Q8IV63 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VRK3Q8IV63 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VRK3Q8IV63 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
VRK3Q8IV63 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
VRK3Q8IV63 AC104118.1-201ENST00000607625 1589 ntBASIC4.27□□□□□ -1.73
VRK3Q8IV63 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.27□□□□□ -1.73
VRK3Q8IV63 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VRK3Q8IV63 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms