Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
RNF135Q8IUD6 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF135Q8IUD6 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
RNF135Q8IUD6 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.95□□□□□ -1.46
RNF135Q8IUD6 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
RNF135Q8IUD6 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.94□□□□□ -1.46
RNF135Q8IUD6 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RNF135Q8IUD6 AP005432.1-201ENST00000580891 3485 ntBASIC5.94□□□□□ -1.46
RNF135Q8IUD6 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RNF135Q8IUD6 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RNF135Q8IUD6 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RNF135Q8IUD6 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RNF135Q8IUD6 AC093671.1-201ENST00000624981 2929 ntBASIC5.94□□□□□ -1.46
RNF135Q8IUD6 AC091812.1-201ENST00000432235 1948 ntBASIC5.94□□□□□ -1.46
RNF135Q8IUD6 HSPA8P4-201ENST00000511877 1920 ntBASIC5.94□□□□□ -1.46
RNF135Q8IUD6 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RNF135Q8IUD6 Y_RNA.2-201ENST00000362330 96 ntBASIC5.94□□□□□ -1.46
RNF135Q8IUD6 Y_RNA.515-201ENST00000384535 112 ntBASIC5.94□□□□□ -1.46
RNF135Q8IUD6 AC091390.1-201ENST00000433904 331 ntBASIC5.94□□□□□ -1.46
RNF135Q8IUD6 AC073410.1-201ENST00000435125 589 ntBASIC5.94□□□□□ -1.46
RNF135Q8IUD6 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.94□□□□□ -1.46
RNF135Q8IUD6 CYCSP34-201ENST00000458172 304 ntBASIC5.94□□□□□ -1.46
RNF135Q8IUD6 snoU13.29-201ENST00000459370 104 ntBASIC5.94□□□□□ -1.46
RNF135Q8IUD6 TRBV5-2-201ENST00000489095 273 ntBASIC5.94□□□□□ -1.46
RNF135Q8IUD6 AC026979.1-201ENST00000492525 396 ntBASIC5.94□□□□□ -1.46
RNF135Q8IUD6 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.94□□□□□ -1.46
RNF135Q8IUD6 TOMM22P4-201ENST00000511318 336 ntBASIC5.94□□□□□ -1.46
RNF135Q8IUD6 AC126177.5-201ENST00000549599 178 ntBASIC5.94□□□□□ -1.46
RNF135Q8IUD6 AC025423.5-201ENST00000550230 219 ntBASIC5.94□□□□□ -1.46
RNF135Q8IUD6 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.94□□□□□ -1.46
RNF135Q8IUD6 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.94□□□□□ -1.46
RNF135Q8IUD6 MIR4512-201ENST00000583257 77 ntBASIC5.94□□□□□ -1.46
RNF135Q8IUD6 AC005899.2-201ENST00000584353 90 ntBASIC5.94□□□□□ -1.46
RNF135Q8IUD6 AL034351.1-201ENST00000605288 668 ntBASIC5.94□□□□□ -1.46
RNF135Q8IUD6 MIR6130-201ENST00000619419 109 ntBASIC5.94□□□□□ -1.46
RNF135Q8IUD6 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RNF135Q8IUD6 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RNF135Q8IUD6 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RNF135Q8IUD6 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RNF135Q8IUD6 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.94□□□□□ -1.46
RNF135Q8IUD6 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RNF135Q8IUD6 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
RNF135Q8IUD6 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.94□□□□□ -1.46
RNF135Q8IUD6 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.94□□□□□ -1.46
RNF135Q8IUD6 AC004656.1-201ENST00000568479 4951 ntBASIC5.94□□□□□ -1.46
RNF135Q8IUD6 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RNF135Q8IUD6 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 AC087516.1-201ENST00000561236 2428 ntBASIC5.93□□□□□ -1.46
RNF135Q8IUD6 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 RNU6-472P-201ENST00000384299 107 ntBASIC5.93□□□□□ -1.46
RNF135Q8IUD6 RNU6-823P-201ENST00000391042 103 ntBASIC5.93□□□□□ -1.46
RNF135Q8IUD6 MIR548I2-201ENST00000408348 149 ntBASIC5.93□□□□□ -1.46
RNF135Q8IUD6 EIF4EP1-201ENST00000422311 642 ntBASIC5.93□□□□□ -1.46
RNF135Q8IUD6 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 NOTCH2P1-201ENST00000443481 624 ntBASIC5.93□□□□□ -1.46
RNF135Q8IUD6 RNU6-1132P-201ENST00000459214 107 ntBASIC5.93□□□□□ -1.46
RNF135Q8IUD6 RPL21P103-201ENST00000479921 488 ntBASIC5.93□□□□□ -1.46
RNF135Q8IUD6 DEFB109F-201ENST00000491870 277 ntBASIC5.93□□□□□ -1.46
RNF135Q8IUD6 SLC25A15P5-201ENST00000508033 253 ntBASIC5.93□□□□□ -1.46
RNF135Q8IUD6 AP006587.4-201ENST00000526053 529 ntBASIC5.93□□□□□ -1.46
RNF135Q8IUD6 AC091516.1-201ENST00000549191 703 ntBASIC5.93□□□□□ -1.46
RNF135Q8IUD6 AL049779.3-201ENST00000557141 606 ntBASIC5.93□□□□□ -1.46
RNF135Q8IUD6 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 AC006116.3-201ENST00000592968 361 ntBASIC5.93□□□□□ -1.46
RNF135Q8IUD6 FAM25E-202ENST00000608562 189 ntBASIC5.93□□□□□ -1.46
RNF135Q8IUD6 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 AC091953.3-201ENST00000623220 236 ntBASIC5.93□□□□□ -1.46
RNF135Q8IUD6 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 AC097063.1-201ENST00000426714 1797 ntBASIC5.93□□□□□ -1.46
RNF135Q8IUD6 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.93□□□□□ -1.46
RNF135Q8IUD6 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.92□□□□□ -1.46
RNF135Q8IUD6 SNORA41-201ENST00000384675 132 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 RNU11-201ENST00000387069 134 ntBASIC5.92□□□□□ -1.46
RNF135Q8IUD6 CYB5AP4-201ENST00000396692 399 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms