Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP48Q86UV5 AL445487.1-201ENST00000415694 1580 ntBASIC5.58□□□□□ -1.52
USP48Q86UV5 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
USP48Q86UV5 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
USP48Q86UV5 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
USP48Q86UV5 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.58□□□□□ -1.52
USP48Q86UV5 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP48Q86UV5 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP48Q86UV5 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
USP48Q86UV5 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP48Q86UV5 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.57□□□□□ -1.52
USP48Q86UV5 AC021146.4-201ENST00000309229 279 ntBASIC5.57□□□□□ -1.52
USP48Q86UV5 RNY3P13-201ENST00000365542 102 ntBASIC5.57□□□□□ -1.52
USP48Q86UV5 XGY1-201ENST00000381172 446 ntBASIC5.57□□□□□ -1.52
USP48Q86UV5 Y_RNA.493-201ENST00000384422 102 ntBASIC5.57□□□□□ -1.52
USP48Q86UV5 MIR659-201ENST00000384963 97 ntBASIC5.57□□□□□ -1.52
USP48Q86UV5 MIR670-201ENST00000390142 98 ntBASIC5.57□□□□□ -1.52
USP48Q86UV5 ARL4AP5-201ENST00000404372 599 ntBASIC5.57□□□□□ -1.52
USP48Q86UV5 RNU6-908P-201ENST00000410160 94 ntBASIC5.57□□□□□ -1.52
USP48Q86UV5 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.57□□□□□ -1.52
USP48Q86UV5 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.57□□□□□ -1.52
USP48Q86UV5 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.57□□□□□ -1.52
USP48Q86UV5 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.57□□□□□ -1.52
USP48Q86UV5 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.57□□□□□ -1.52
USP48Q86UV5 AC140076.1-201ENST00000449897 361 ntBASIC5.57□□□□□ -1.52
USP48Q86UV5 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.57□□□□□ -1.52
USP48Q86UV5 AC023632.4-201ENST00000517783 191 ntBASIC5.57□□□□□ -1.52
USP48Q86UV5 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.57□□□□□ -1.52
USP48Q86UV5 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.57□□□□□ -1.52
USP48Q86UV5 AP003385.6-201ENST00000531603 374 ntBASIC5.57□□□□□ -1.52
USP48Q86UV5 OR8L1P-201ENST00000534005 955 ntBASIC5.57□□□□□ -1.52
USP48Q86UV5 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP48Q86UV5 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.57□□□□□ -1.52
USP48Q86UV5 HMGB1P6-201ENST00000569046 646 ntBASIC5.57□□□□□ -1.52
USP48Q86UV5 RN7SL176P-201ENST00000580352 264 ntBASIC5.57□□□□□ -1.52
USP48Q86UV5 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.57□□□□□ -1.52
USP48Q86UV5 AC098848.2-201ENST00000588023 330 ntBASIC5.57□□□□□ -1.52
USP48Q86UV5 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.57□□□□□ -1.52
USP48Q86UV5 AC245517.5-201ENST00000611529 162 ntBASIC5.57□□□□□ -1.52
USP48Q86UV5 AC010133.1-201ENST00000615809 842 ntBASIC5.57□□□□□ -1.52
USP48Q86UV5 YWHAEP7-203ENST00000622054 312 ntBASIC5.57□□□□□ -1.52
USP48Q86UV5 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP48Q86UV5 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
USP48Q86UV5 ZFRP1-201ENST00000457579 2970 ntBASIC5.57□□□□□ -1.52
USP48Q86UV5 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
USP48Q86UV5 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
USP48Q86UV5 AC027287.1-201ENST00000553115 1453 ntBASIC5.57□□□□□ -1.52
USP48Q86UV5 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.57□□□□□ -1.52
USP48Q86UV5 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP48Q86UV5 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP48Q86UV5 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
USP48Q86UV5 AC108467.2-201ENST00000617640 1597 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP48Q86UV5 OR1S2-201ENST00000302592 978 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 Y_RNA.160-201ENST00000363677 92 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 AC019155.1-201ENST00000382242 574 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 SNORA70E-201ENST00000384492 135 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 MIR195-201ENST00000385194 87 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 RNU6-821P-201ENST00000390995 107 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 AL080315.1-201ENST00000406055 466 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 RNA5SP317-201ENST00000410176 116 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 RNA5SP311-201ENST00000411290 116 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 RPL23AP26-201ENST00000412728 464 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.56□□□□□ -1.52
USP48Q86UV5 RPL21P111-201ENST00000418453 477 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.56□□□□□ -1.52
USP48Q86UV5 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.56□□□□□ -1.52
USP48Q86UV5 RPL23AP30-201ENST00000432419 501 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.56□□□□□ -1.52
USP48Q86UV5 ELOCP18-201ENST00000434209 337 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP48Q86UV5 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.56□□□□□ -1.52
USP48Q86UV5 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.56□□□□□ -1.52
USP48Q86UV5 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.56□□□□□ -1.52
USP48Q86UV5 NANOGP10-201ENST00000453325 895 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 RNU6-261P-201ENST00000459506 102 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.56□□□□□ -1.52
USP48Q86UV5 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP48Q86UV5 AC017037.2-201ENST00000513850 890 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 RNA5SP315-201ENST00000516340 116 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 RN7SKP116-201ENST00000516902 319 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 RNA5SP312-201ENST00000517068 116 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 OR4R1P-201ENST00000529879 463 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP48Q86UV5 OR8R1P-201ENST00000543943 764 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.56□□□□□ -1.52
USP48Q86UV5 AL138976.2-201ENST00000563989 694 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 AC034105.3-201ENST00000565294 442 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 AC006272.2-201ENST00000594725 163 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 AC006133.1-201ENST00000617106 264 ntBASIC5.56□□□□□ -1.52
USP48Q86UV5 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
USP48Q86UV5 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.56□□□□□ -1.52
USP48Q86UV5 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.56□□□□□ -1.52
USP48Q86UV5 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
USP48Q86UV5 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP48Q86UV5 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.56□□□□□ -1.52
USP48Q86UV5 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
USP48Q86UV5 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP48Q86UV5 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
USP48Q86UV5 CKAP2P1-201ENST00000555477 2049 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms