Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 Y_RNA.401-201ENST00000383965 117 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 MIR600-201ENST00000385007 98 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 DUTP5-201ENST00000406790 469 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 RAC1P6-201ENST00000423911 575 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 RPL7P46-201ENST00000425129 740 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 AL451139.1-201ENST00000434718 346 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 RPL10P17-201ENST00000453852 316 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 ELOCP24-201ENST00000456370 334 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 DEFB109F-201ENST00000491870 277 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 AC072052.1-201ENST00000496556 306 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 RNU6-27P-201ENST00000516146 107 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 RNU6-1213P-201ENST00000517075 94 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 IGLVIV-53-201ENST00000520107 367 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 AP003122.3-201ENST00000526316 255 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 AL117187.1-201ENST00000555482 181 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 MIR3149-201ENST00000584629 83 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 VN1R107P-201ENST00000601784 209 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 7SK.7-201ENST00000603504 247 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 AP001486.3-201ENST00000615334 372 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 AL357559.1-201ENST00000622228 274 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 AC091925.2-201ENST00000625059 256 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 Z95327.2-201ENST00000414579 1873 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 SNORA17.1-201ENST00000362945 126 ntBASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 U3.3-201ENST00000362986 216 ntBASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 RNA5SP90-201ENST00000364801 99 ntBASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 RPS12P24-201ENST00000412619 387 ntBASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 CKS1BP6-201ENST00000424932 240 ntBASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 SKA2P1-201ENST00000425592 390 ntBASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AL160004.2-201ENST00000432935 350 ntBASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 TXNP1-201ENST00000441872 371 ntBASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AL163193.1-201ENST00000444895 788 ntBASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 RPS17P13-201ENST00000448974 407 ntBASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AC053481.1-201ENST00000467217 306 ntBASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 CYCSP40-201ENST00000575927 294 ntBASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 SNORD91B-202ENST00000608459 222 ntBASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AC012409.4-201ENST00000612923 249 ntBASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AL157817.1-201ENST00000614264 790 ntBASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AL122125.1-201ENST00000616999 600 ntBASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AC119674.1-207ENST00000641355 633 ntBASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 SMG1P4-204ENST00000523028 4131 ntBASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AP000756.2-201ENST00000624168 2567 ntBASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF111Q6ZNA4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.85□□□□□ -1.63
RNF111Q6ZNA4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RNF111Q6ZNA4 AC011978.2-201ENST00000569835 2054 ntBASIC4.85□□□□□ -1.63
RNF111Q6ZNA4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF111Q6ZNA4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF111Q6ZNA4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF111Q6ZNA4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms