Protein–RNA interactions for Protein: Q12947

FOXF2, Forkhead box protein F2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF2Q12947 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXF2Q12947 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.97□□□□□ -1.77
FOXF2Q12947 DHX9P1-201ENST00000436565 3076 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXF2Q12947 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
FOXF2Q12947 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
FOXF2Q12947 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXF2Q12947 RNU4-1-201ENST00000363925 141 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 Y_RNA.202-201ENST00000364083 110 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 Y_RNA.387-201ENST00000383918 102 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 RNU6-474P-201ENST00000384243 107 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 Y_RNA.579-201ENST00000390939 94 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.97□□□□□ -1.77
FOXF2Q12947 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.97□□□□□ -1.77
FOXF2Q12947 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.97□□□□□ -1.77
FOXF2Q12947 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.97□□□□□ -1.77
FOXF2Q12947 RPL23AP74-201ENST00000437246 471 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 HMGB1P18-201ENST00000438801 619 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 RPS15AP9-201ENST00000439856 381 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 HSPE1P28-201ENST00000443139 211 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 PHBP16-201ENST00000446318 950 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 PTMAP3-201ENST00000447474 330 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC3.97□□□□□ -1.77
FOXF2Q12947 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.97□□□□□ -1.77
FOXF2Q12947 SNORD19B-201ENST00000459623 84 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 RN7SL98P-201ENST00000462271 300 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 AC053481.1-201ENST00000467217 306 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 PABPC1P3-201ENST00000469174 459 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.97□□□□□ -1.77
FOXF2Q12947 AC104563.1-201ENST00000476147 376 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 AC034222.1-201ENST00000494052 532 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.97□□□□□ -1.77
FOXF2Q12947 AC010587.1-201ENST00000505809 469 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.97□□□□□ -1.77
FOXF2Q12947 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.97□□□□□ -1.77
FOXF2Q12947 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
FOXF2Q12947 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.97□□□□□ -1.77
FOXF2Q12947 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.97□□□□□ -1.77
FOXF2Q12947 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC3.97□□□□□ -1.77
FOXF2Q12947 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.97□□□□□ -1.77
FOXF2Q12947 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.97□□□□□ -1.77
FOXF2Q12947 MIR4504-201ENST00000577413 92 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
FOXF2Q12947 AC136443.5-201ENST00000603741 370 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 AC091979.2-201ENST00000607514 214 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 BX664608.1-201ENST00000610519 487 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 MIR6716-201ENST00000613413 80 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 AL158196.1-201ENST00000616786 434 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
FOXF2Q12947 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.97□□□□□ -1.77
FOXF2Q12947 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.97□□□□□ -1.77
FOXF2Q12947 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXF2Q12947 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXF2Q12947 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 MTND5P1-201ENST00000445440 1375 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
FOXF2Q12947 MTND4P35-201ENST00000604257 1375 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 XPOTP1-201ENST00000443317 2398 ntBASIC3.97□□□□□ -1.77
FOXF2Q12947 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.97□□□□□ -1.77
FOXF2Q12947 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
FOXF2Q12947 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.97□□□□□ -1.77
FOXF2Q12947 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.97□□□□□ -1.77
FOXF2Q12947 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.77
FOXF2Q12947 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
FOXF2Q12947 AC092079.1-201ENST00000558620 1985 ntBASIC3.96□□□□□ -1.77
FOXF2Q12947 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
FOXF2Q12947 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
FOXF2Q12947 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
FOXF2Q12947 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
FOXF2Q12947 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
FOXF2Q12947 AC126323.6-202ENST00000568092 3511 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
FOXF2Q12947 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
FOXF2Q12947 RPL7P26-201ENST00000333817 754 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 MIR369-201ENST00000362155 70 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 Y_RNA.259-201ENST00000364619 101 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 Y_RNA.459-201ENST00000384251 102 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 RNU6-463P-201ENST00000384340 107 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 RNU2-9P-201ENST00000410194 145 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 RNU6-1148P-201ENST00000410992 104 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 RN7SKP247-201ENST00000411094 308 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.96□□□□□ -1.78
FOXF2Q12947 AC011933.1-201ENST00000413334 321 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 AL139095.3-201ENST00000419672 1203 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 AC099336.2-201ENST00000422457 254 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 MTCYBP8-201ENST00000422855 651 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 AC018630.2-202ENST00000422992 927 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 AC009965.2-201ENST00000425328 970 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.96□□□□□ -1.78
FOXF2Q12947 AC096632.1-201ENST00000427395 310 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 AC004975.1-201ENST00000428733 208 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.96□□□□□ -1.78
FOXF2Q12947 IPO7P1-201ENST00000442031 636 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.96□□□□□ -1.78
FOXF2Q12947 AC012671.1-201ENST00000451912 203 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 NUTF2P7-201ENST00000453086 375 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 AL354710.1-201ENST00000453641 246 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 TRBV26-201ENST00000456572 344 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 AC099560.2-201ENST00000457554 255 ntBASIC3.96□□□□□ -1.78
FOXF2Q12947 AC116533.1-201ENST00000459748 321 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms