Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 MTND4P8-201ENST00000514997 1362 ntBASIC2.23□□□□□ -2.05
FOXF1Q12946 AL136520.1-201ENST00000600311 1322 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 MFSD8-213ENST00000641134 1327 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 AC073055.1-201ENST00000456901 1621 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 MIR6073-201ENST00000352083 89 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 AL672167.1-206ENST00000356293 943 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 SNORD56.4-201ENST00000363883 71 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 DEFA7P-201ENST00000382676 285 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 ARF4P3-201ENST00000397387 509 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.22□□□□□ -2.05
FOXF1Q12946 RNU4-65P-201ENST00000410473 140 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 AL096701.2-201ENST00000416920 238 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.22□□□□□ -2.05
FOXF1Q12946 TOMM22P1-201ENST00000418578 312 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.22□□□□□ -2.05
FOXF1Q12946 MTCO3P43-201ENST00000440974 771 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 AC087879.1-201ENST00000474343 374 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.22□□□□□ -2.05
FOXF1Q12946 AC114781.4-201ENST00000513707 639 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.22□□□□□ -2.05
FOXF1Q12946 RPL7P20-201ENST00000520308 745 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 AC027176.1-201ENST00000560204 514 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.22□□□□□ -2.05
FOXF1Q12946 ATP5F1P7-201ENST00000567330 760 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 AC060766.3-201ENST00000591442 263 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 DUXAP4-201ENST00000603046 613 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 AL450270.1-201ENST00000606160 391 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 AC026790.2-201ENST00000606282 430 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 MIR6852-201ENST00000621699 66 ntBASIC2.22□□□□□ -2.05
FOXF1Q12946 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.22□□□□□ -2.05
FOXF1Q12946 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.22□□□□□ -2.05
FOXF1Q12946 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
FOXF1Q12946 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
FOXF1Q12946 AC008432.1-201ENST00000615912 1320 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.21□□□□□ -2.06
FOXF1Q12946 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
FOXF1Q12946 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
FOXF1Q12946 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
FOXF1Q12946 ANKRD36P1-201ENST00000344424 659 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 RNU6-50P-201ENST00000362356 103 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 RNA5SP27-201ENST00000363839 119 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.21□□□□□ -2.06
FOXF1Q12946 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.21□□□□□ -2.06
FOXF1Q12946 DEFB109C-201ENST00000382575 264 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 DEFB109B-201ENST00000382656 264 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 RNU6-1151P-201ENST00000384684 107 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
FOXF1Q12946 ATP5F1P6-201ENST00000402768 767 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 RNA5SP181-201ENST00000410246 98 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.21□□□□□ -2.06
FOXF1Q12946 AC098826.1-201ENST00000433943 471 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 RPS7P2-201ENST00000435134 607 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 RPS12P2-201ENST00000439728 269 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 AL691517.1-201ENST00000440833 1235 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 RPL17P49-201ENST00000443728 411 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 AL353718.1-201ENST00000451028 517 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 BX248409.1-201ENST00000455497 255 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 AC108729.2-201ENST00000476543 840 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 AC015724.1-201ENST00000478577 156 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 AC069306.1-201ENST00000507006 843 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.21□□□□□ -2.06
FOXF1Q12946 AC103783.1-201ENST00000520506 373 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 AP003385.6-201ENST00000531603 374 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.21□□□□□ -2.06
FOXF1Q12946 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.21□□□□□ -2.06
FOXF1Q12946 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.21□□□□□ -2.06
FOXF1Q12946 AC010620.2-201ENST00000600135 313 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 AC103881.1-201ENST00000603476 538 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2.21□□□□□ -2.06
FOXF1Q12946 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.21□□□□□ -2.06
FOXF1Q12946 FO624990.1-201ENST00000636373 85 ntBASIC2.21□□□□□ -2.06
FOXF1Q12946 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.21□□□□□ -2.06
FOXF1Q12946 CUL1P1-201ENST00000509510 2425 ntBASIC2.2□□□□□ -2.06
FOXF1Q12946 ZNF271P-202ENST00000465539 1970 ntBASIC2.2□□□□□ -2.06
FOXF1Q12946 AC069528.2-201ENST00000624849 1991 ntBASIC2.2□□□□□ -2.06
FOXF1Q12946 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.2□□□□□ -2.06
FOXF1Q12946 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
FOXF1Q12946 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
FOXF1Q12946 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
FOXF1Q12946 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.2□□□□□ -2.06
FOXF1Q12946 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
FOXF1Q12946 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
FOXF1Q12946 RNU6-796P-201ENST00000391086 107 ntBASIC2.2□□□□□ -2.06
FOXF1Q12946 AL359511.1-201ENST00000402970 211 ntBASIC2.2□□□□□ -2.06
FOXF1Q12946 MIR1289-1-201ENST00000408836 144 ntBASIC2.2□□□□□ -2.06
FOXF1Q12946 AC073264.1-201ENST00000411508 416 ntBASIC2.2□□□□□ -2.06
FOXF1Q12946 RPS3AP9-201ENST00000417027 792 ntBASIC2.2□□□□□ -2.06
FOXF1Q12946 OFD1P18Y-201ENST00000420889 959 ntBASIC2.2□□□□□ -2.06
FOXF1Q12946 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.2□□□□□ -2.06
FOXF1Q12946 VN1R42P-201ENST00000424651 344 ntBASIC2.2□□□□□ -2.06
FOXF1Q12946 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.2□□□□□ -2.06
FOXF1Q12946 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.2□□□□□ -2.06
FOXF1Q12946 RNFT1P2-201ENST00000443064 757 ntBASIC2.2□□□□□ -2.06
FOXF1Q12946 MTND1P33-201ENST00000446251 917 ntBASIC2.2□□□□□ -2.06
FOXF1Q12946 Z99714.1-201ENST00000450463 807 ntBASIC2.2□□□□□ -2.06
FOXF1Q12946 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.2□□□□□ -2.06
FOXF1Q12946 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.2□□□□□ -2.06
FOXF1Q12946 AL109741.2-201ENST00000455561 343 ntBASIC2.2□□□□□ -2.06
FOXF1Q12946 NECAP1P2-201ENST00000455668 727 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms