Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 HMGB1P27-201ENST00000431429 603 ntBASIC3.22□□□□□ -1.89
HMGXB3Q12766 MOB1AP2-201ENST00000446060 614 ntBASIC3.22□□□□□ -1.89
HMGXB3Q12766 RPS27AP18-201ENST00000515536 459 ntBASIC3.22□□□□□ -1.89
HMGXB3Q12766 IGLV3-17-201ENST00000519099 244 ntBASIC3.22□□□□□ -1.89
HMGXB3Q12766 MIR4506-201ENST00000584693 77 ntBASIC3.22□□□□□ -1.89
HMGXB3Q12766 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.22□□□□□ -1.89
HMGXB3Q12766 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.22□□□□□ -1.89
HMGXB3Q12766 Z82209.1-201ENST00000422141 2135 ntBASIC3.22□□□□□ -1.89
HMGXB3Q12766 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMGXB3Q12766 Y_RNA.224-201ENST00000364308 111 ntBASIC3.21□□□□□ -1.9
HMGXB3Q12766 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMGXB3Q12766 DNAJC19P4-201ENST00000440115 345 ntBASIC3.21□□□□□ -1.9
HMGXB3Q12766 RPL34P26-201ENST00000445636 354 ntBASIC3.21□□□□□ -1.9
HMGXB3Q12766 TTC39CP1-201ENST00000512513 755 ntBASIC3.21□□□□□ -1.9
HMGXB3Q12766 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.21□□□□□ -1.9
HMGXB3Q12766 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGXB3Q12766 AC009314.1-201ENST00000603871 304 ntBASIC3.21□□□□□ -1.9
HMGXB3Q12766 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.21□□□□□ -1.9
HMGXB3Q12766 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.21□□□□□ -1.9
HMGXB3Q12766 AC244517.1-201ENST00000606030 2086 ntBASIC3.21□□□□□ -1.9
HMGXB3Q12766 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGXB3Q12766 AC092798.1-201ENST00000458542 409 ntBASIC3.2□□□□□ -1.9
HMGXB3Q12766 GZMAP1-201ENST00000503054 631 ntBASIC3.2□□□□□ -1.9
HMGXB3Q12766 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.2□□□□□ -1.9
HMGXB3Q12766 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGXB3Q12766 OR5D17P-201ENST00000531492 978 ntBASIC3.2□□□□□ -1.9
HMGXB3Q12766 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.2□□□□□ -1.9
HMGXB3Q12766 AP001542.2-201ENST00000593141 364 ntBASIC3.2□□□□□ -1.9
HMGXB3Q12766 DCAF13P1-201ENST00000495256 1330 ntBASIC3.2□□□□□ -1.9
HMGXB3Q12766 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.2□□□□□ -1.9
HMGXB3Q12766 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.2□□□□□ -1.9
HMGXB3Q12766 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HMGXB3Q12766 RNU6-582P-201ENST00000362989 107 ntBASIC3.19□□□□□ -1.9
HMGXB3Q12766 RPL23AP39-201ENST00000415533 405 ntBASIC3.19□□□□□ -1.9
HMGXB3Q12766 RPL23AP62-201ENST00000463396 453 ntBASIC3.19□□□□□ -1.9
HMGXB3Q12766 AC104435.1-201ENST00000483483 166 ntBASIC3.19□□□□□ -1.9
HMGXB3Q12766 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.19□□□□□ -1.9
HMGXB3Q12766 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.19□□□□□ -1.9
HMGXB3Q12766 TBCAP3-201ENST00000512475 312 ntBASIC3.19□□□□□ -1.9
HMGXB3Q12766 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.19□□□□□ -1.9
HMGXB3Q12766 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGXB3Q12766 VN1R74P-201ENST00000613259 503 ntBASIC3.19□□□□□ -1.9
HMGXB3Q12766 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HMGXB3Q12766 XIAPP3-201ENST00000312918 795 ntBASIC3.19□□□□□ -1.9
HMGXB3Q12766 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGXB3Q12766 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.19□□□□□ -1.9
HMGXB3Q12766 USP9YP7-201ENST00000436723 430 ntBASIC3.19□□□□□ -1.9
HMGXB3Q12766 USP9YP32-201ENST00000452432 430 ntBASIC3.19□□□□□ -1.9
HMGXB3Q12766 AC008126.1-201ENST00000549019 480 ntBASIC3.19□□□□□ -1.9
HMGXB3Q12766 AC103987.3-201ENST00000582071 292 ntBASIC3.19□□□□□ -1.9
HMGXB3Q12766 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGXB3Q12766 BX248123.2-201ENST00000606318 124 ntBASIC3.19□□□□□ -1.9
HMGXB3Q12766 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.19□□□□□ -1.9
HMGXB3Q12766 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HMGXB3Q12766 AP003499.2-201ENST00000624100 483 ntBASIC3.19□□□□□ -1.9
HMGXB3Q12766 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HMGXB3Q12766 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
HMGXB3Q12766 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.18□□□□□ -1.9
HMGXB3Q12766 U3.37-201ENST00000408528 213 ntBASIC3.18□□□□□ -1.9
HMGXB3Q12766 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGXB3Q12766 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGXB3Q12766 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
HMGXB3Q12766 AL035411.2-201ENST00000604022 421 ntBASIC3.18□□□□□ -1.9
HMGXB3Q12766 MIR6504-201ENST00000613520 61 ntBASIC3.18□□□□□ -1.9
HMGXB3Q12766 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
HMGXB3Q12766 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HMGXB3Q12766 RNU4-74P-201ENST00000411280 161 ntBASIC3.17□□□□□ -1.9
HMGXB3Q12766 TVP23BP2-201ENST00000455082 615 ntBASIC3.17□□□□□ -1.9
HMGXB3Q12766 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.17□□□□□ -1.9
HMGXB3Q12766 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.17□□□□□ -1.9
HMGXB3Q12766 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGXB3Q12766 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
HMGXB3Q12766 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.16□□□□□ -1.9
HMGXB3Q12766 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGXB3Q12766 EIF1AXP1-201ENST00000419267 435 ntBASIC3.16□□□□□ -1.9
HMGXB3Q12766 AC009237.2-201ENST00000421358 284 ntBASIC3.16□□□□□ -1.9
HMGXB3Q12766 SAR1AP4-201ENST00000429225 591 ntBASIC3.16□□□□□ -1.9
HMGXB3Q12766 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.16□□□□□ -1.9
HMGXB3Q12766 AL138799.3-201ENST00000438968 350 ntBASIC3.16□□□□□ -1.9
HMGXB3Q12766 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.16□□□□□ -1.9
HMGXB3Q12766 AL137159.1-201ENST00000452808 512 ntBASIC3.16□□□□□ -1.9
HMGXB3Q12766 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.16□□□□□ -1.9
HMGXB3Q12766 PTP4A1P6-201ENST00000531034 478 ntBASIC3.16□□□□□ -1.9
HMGXB3Q12766 AC007536.1-201ENST00000533382 349 ntBASIC3.16□□□□□ -1.9
HMGXB3Q12766 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGXB3Q12766 AC090751.1-201ENST00000566966 267 ntBASIC3.16□□□□□ -1.9
HMGXB3Q12766 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.16□□□□□ -1.9
HMGXB3Q12766 WISP1-OT1-201ENST00000602893 642 ntBASIC3.16□□□□□ -1.9
HMGXB3Q12766 MIR8081-201ENST00000611533 95 ntBASIC3.16□□□□□ -1.9
HMGXB3Q12766 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGXB3Q12766 API5P2-201ENST00000397055 1498 ntBASIC3.16□□□□□ -1.9
HMGXB3Q12766 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.16□□□□□ -1.9
HMGXB3Q12766 RNU2-20P-201ENST00000410425 191 ntBASIC3.15□□□□□ -1.9
HMGXB3Q12766 VN1R31P-201ENST00000417498 730 ntBASIC3.15□□□□□ -1.9
HMGXB3Q12766 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.15□□□□□ -1.9
HMGXB3Q12766 AL138787.1-202ENST00000437804 898 ntBASIC3.15□□□□□ -1.9
HMGXB3Q12766 AL157827.1-201ENST00000447622 132 ntBASIC3.15□□□□□ -1.9
HMGXB3Q12766 AC135999.1-201ENST00000478962 479 ntBASIC3.15□□□□□ -1.9
HMGXB3Q12766 FABP5P6-201ENST00000510588 409 ntBASIC3.15□□□□□ -1.9
HMGXB3Q12766 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms