Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.6□□□□□ -1.67
IRF9Q00978 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
IRF9Q00978 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
IRF9Q00978 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
IRF9Q00978 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
IRF9Q00978 AL049555.1-201ENST00000562834 1933 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
IRF9Q00978 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
IRF9Q00978 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
IRF9Q00978 AC139713.2-215ENST00000641428 5037 ntBASIC4.6□□□□□ -1.67
IRF9Q00978 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
IRF9Q00978 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
IRF9Q00978 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
IRF9Q00978 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
IRF9Q00978 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
IRF9Q00978 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
IRF9Q00978 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
IRF9Q00978 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
IRF9Q00978 RNU5E-6P-201ENST00000365574 115 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
IRF9Q00978 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
IRF9Q00978 RNA5SP296-201ENST00000410523 111 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 AC007390.1-201ENST00000415722 356 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 AC016831.2-201ENST00000417179 352 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.59□□□□□ -1.67
IRF9Q00978 RPL12P3-201ENST00000440080 396 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.59□□□□□ -1.67
IRF9Q00978 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
IRF9Q00978 RPS5P7-201ENST00000456664 608 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 SNORD97-201ENST00000459187 142 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 HMGN2P26-201ENST00000463169 339 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 RPL7L1P8-201ENST00000469911 741 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 RPS15AP36-201ENST00000492022 382 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 SCARNA22-201ENST00000503991 125 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
IRF9Q00978 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.59□□□□□ -1.67
IRF9Q00978 AC026801.2-201ENST00000515352 425 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.59□□□□□ -1.67
IRF9Q00978 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.59□□□□□ -1.67
IRF9Q00978 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
IRF9Q00978 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.59□□□□□ -1.67
IRF9Q00978 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
IRF9Q00978 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.59□□□□□ -1.67
IRF9Q00978 AC021006.3-201ENST00000530771 192 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 OR5AL2P-201ENST00000532185 920 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.59□□□□□ -1.67
IRF9Q00978 AC008033.2-201ENST00000542626 177 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.59□□□□□ -1.67
IRF9Q00978 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.59□□□□□ -1.67
IRF9Q00978 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.59□□□□□ -1.67
IRF9Q00978 OR1F2P-201ENST00000570470 933 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.59□□□□□ -1.67
IRF9Q00978 AC012669.1-201ENST00000603209 283 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 AC091979.2-201ENST00000607514 214 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
IRF9Q00978 AC068870.2-201ENST00000620635 389 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 AL391684.1-202ENST00000641293 1636 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 MAPK10-303ENST00000641324 3959 ntBASIC4.59□□□□□ -1.67
IRF9Q00978 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.59□□□□□ -1.67
IRF9Q00978 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
IRF9Q00978 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
IRF9Q00978 INTS6P1-201ENST00000504674 2530 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.58□□□□□ -1.68
IRF9Q00978 AC092435.4-201ENST00000623012 4159 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 AC244517.1-201ENST00000606030 2086 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
IRF9Q00978 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
IRF9Q00978 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
IRF9Q00978 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
IRF9Q00978 AC067945.1-201ENST00000342609 618 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 RNA5SP305-201ENST00000362665 119 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 RNU6-552P-201ENST00000362869 119 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 RNU6-1011P-201ENST00000384668 107 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
IRF9Q00978 RPL32P23-201ENST00000397237 405 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 MIR937-201ENST00000401271 86 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 AL356432.1-201ENST00000405809 419 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.58□□□□□ -1.68
IRF9Q00978 RPS7P15-201ENST00000415804 584 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 UBE2FP1-201ENST00000416536 447 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.58□□□□□ -1.68
IRF9Q00978 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.58□□□□□ -1.68
IRF9Q00978 RPL35AP12-201ENST00000425362 338 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 MTCO3P46-201ENST00000425787 232 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.58□□□□□ -1.68
IRF9Q00978 AC008850.1-201ENST00000427546 362 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 RPL21P91-201ENST00000429231 479 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 RPL36AP6-201ENST00000435770 321 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 TAAR7P-201ENST00000436141 242 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 MTND6P18-201ENST00000439477 513 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.58□□□□□ -1.68
IRF9Q00978 RPS27AP1-201ENST00000475545 471 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.58□□□□□ -1.68
IRF9Q00978 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
IRF9Q00978 FGF7P4-201ENST00000509595 295 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 AC004062.1-201ENST00000509926 645 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 RNU6-1095P-201ENST00000516148 108 ntBASIC4.58□□□□□ -1.68
IRF9Q00978 Y_RNA.675-201ENST00000516389 149 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms