Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 MTND3P24-201ENST00000506306 329 ntBASIC2.3□□□□□ -2.04
H3F3AP84243 CBX3P3-201ENST00000508108 532 ntBASIC2.3□□□□□ -2.04
H3F3AP84243 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.3□□□□□ -2.04
H3F3AP84243 PRELID3BP4-201ENST00000515476 571 ntBASIC2.3□□□□□ -2.04
H3F3AP84243 RNU6-488P-201ENST00000515918 99 ntBASIC2.3□□□□□ -2.04
H3F3AP84243 RNU6-889P-201ENST00000517189 103 ntBASIC2.3□□□□□ -2.04
H3F3AP84243 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.3□□□□□ -2.04
H3F3AP84243 AC084033.1-201ENST00000550830 633 ntBASIC2.3□□□□□ -2.04
H3F3AP84243 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.3□□□□□ -2.04
H3F3AP84243 MIR5092-201ENST00000583139 88 ntBASIC2.3□□□□□ -2.04
H3F3AP84243 CBX3P2-202ENST00000583365 535 ntBASIC2.3□□□□□ -2.04
H3F3AP84243 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.3□□□□□ -2.04
H3F3AP84243 AC106028.5-201ENST00000610332 395 ntBASIC2.3□□□□□ -2.04
H3F3AP84243 LINC00216-201ENST00000623548 1126 ntBASIC2.3□□□□□ -2.04
H3F3AP84243 AP003485.2-201ENST00000623636 610 ntBASIC2.3□□□□□ -2.04
H3F3AP84243 AC092608.2-201ENST00000624427 218 ntBASIC2.3□□□□□ -2.04
H3F3AP84243 AL109659.3-201ENST00000624985 950 ntBASIC2.3□□□□□ -2.04
H3F3AP84243 AL356118.1-201ENST00000635272 1078 ntBASIC2.3□□□□□ -2.04
H3F3AP84243 MTND2P41-201ENST00000637599 773 ntBASIC2.3□□□□□ -2.04
H3F3AP84243 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
H3F3AP84243 ZNF271P-202ENST00000465539 1970 ntBASIC2.3□□□□□ -2.04
H3F3AP84243 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.3□□□□□ -2.04
H3F3AP84243 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.3□□□□□ -2.04
H3F3AP84243 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
H3F3AP84243 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
H3F3AP84243 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
H3F3AP84243 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
H3F3AP84243 SNORD62.1-201ENST00000362541 86 ntBASIC2.29□□□□□ -2.04
H3F3AP84243 Y_RNA.510-201ENST00000384511 114 ntBASIC2.29□□□□□ -2.04
H3F3AP84243 AL139039.1-201ENST00000401900 692 ntBASIC2.29□□□□□ -2.04
H3F3AP84243 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.29□□□□□ -2.04
H3F3AP84243 RNU6-712P-201ENST00000410558 100 ntBASIC2.29□□□□□ -2.04
H3F3AP84243 FNDC3CP-201ENST00000420795 1155 ntBASIC2.29□□□□□ -2.04
H3F3AP84243 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.29□□□□□ -2.04
H3F3AP84243 ARL5AP4-201ENST00000430731 512 ntBASIC2.29□□□□□ -2.04
H3F3AP84243 AL109741.2-201ENST00000455561 343 ntBASIC2.29□□□□□ -2.04
H3F3AP84243 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.29□□□□□ -2.04
H3F3AP84243 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.29□□□□□ -2.04
H3F3AP84243 AC025881.1-201ENST00000518851 512 ntBASIC2.29□□□□□ -2.04
H3F3AP84243 HMGB1P41-201ENST00000520234 440 ntBASIC2.29□□□□□ -2.04
H3F3AP84243 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.29□□□□□ -2.04
H3F3AP84243 AP005205.1-201ENST00000563503 508 ntBASIC2.29□□□□□ -2.04
H3F3AP84243 MIR3162-201ENST00000581818 82 ntBASIC2.29□□□□□ -2.04
H3F3AP84243 HSPE1P7-201ENST00000604681 321 ntBASIC2.29□□□□□ -2.04
H3F3AP84243 AC004775.1-201ENST00000607389 753 ntBASIC2.29□□□□□ -2.04
H3F3AP84243 BX664608.1-201ENST00000610519 487 ntBASIC2.29□□□□□ -2.04
H3F3AP84243 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.29□□□□□ -2.04
H3F3AP84243 AC110079.1-202ENST00000635213 138 ntBASIC2.29□□□□□ -2.04
H3F3AP84243 AC244517.1-201ENST00000606030 2086 ntBASIC2.29□□□□□ -2.04
H3F3AP84243 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
H3F3AP84243 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.28□□□□□ -2.04
H3F3AP84243 MIR6073-201ENST00000352083 89 ntBASIC2.28□□□□□ -2.04
H3F3AP84243 RNU5D-1-201ENST00000363299 116 ntBASIC2.28□□□□□ -2.04
H3F3AP84243 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.28□□□□□ -2.04
H3F3AP84243 MIR27B-201ENST00000385129 97 ntBASIC2.28□□□□□ -2.04
H3F3AP84243 RNU6-821P-201ENST00000390995 107 ntBASIC2.28□□□□□ -2.04
H3F3AP84243 RNA5SP210-201ENST00000391034 120 ntBASIC2.28□□□□□ -2.04
H3F3AP84243 Z86062.1-201ENST00000406773 777 ntBASIC2.28□□□□□ -2.04
H3F3AP84243 AC092447.6-201ENST00000414578 210 ntBASIC2.28□□□□□ -2.04
H3F3AP84243 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.28□□□□□ -2.04
H3F3AP84243 AC010881.1-201ENST00000433830 235 ntBASIC2.28□□□□□ -2.04
H3F3AP84243 AL590762.3-201ENST00000436372 640 ntBASIC2.28□□□□□ -2.04
H3F3AP84243 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.28□□□□□ -2.04
H3F3AP84243 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.28□□□□□ -2.04
H3F3AP84243 RPS3P1-201ENST00000456781 192 ntBASIC2.28□□□□□ -2.04
H3F3AP84243 AP000852.1-201ENST00000472460 573 ntBASIC2.28□□□□□ -2.04
H3F3AP84243 RN7SL432P-201ENST00000484057 298 ntBASIC2.28□□□□□ -2.04
H3F3AP84243 MTCO1P31-201ENST00000506355 492 ntBASIC2.28□□□□□ -2.04
H3F3AP84243 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.28□□□□□ -2.04
H3F3AP84243 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.28□□□□□ -2.04
H3F3AP84243 RPPH1-2P-201ENST00000516688 293 ntBASIC2.28□□□□□ -2.04
H3F3AP84243 RN7SKP40-201ENST00000517211 242 ntBASIC2.28□□□□□ -2.04
H3F3AP84243 AC087272.1-201ENST00000523624 533 ntBASIC2.28□□□□□ -2.04
H3F3AP84243 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.28□□□□□ -2.04
H3F3AP84243 AP000867.2-201ENST00000532468 320 ntBASIC2.28□□□□□ -2.04
H3F3AP84243 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.28□□□□□ -2.04
H3F3AP84243 OR7K1P-201ENST00000546439 926 ntBASIC2.28□□□□□ -2.04
H3F3AP84243 CKS1BP1-201ENST00000555221 240 ntBASIC2.28□□□□□ -2.04
H3F3AP84243 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.28□□□□□ -2.04
H3F3AP84243 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.28□□□□□ -2.04
H3F3AP84243 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
H3F3AP84243 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.28□□□□□ -2.04
H3F3AP84243 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.28□□□□□ -2.04
H3F3AP84243 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
H3F3AP84243 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.27□□□□□ -2.05
H3F3AP84243 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
H3F3AP84243 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
H3F3AP84243 RNA5SP456-201ENST00000364002 114 ntBASIC2.27□□□□□ -2.05
H3F3AP84243 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.27□□□□□ -2.05
H3F3AP84243 MIR627-201ENST00000384979 97 ntBASIC2.27□□□□□ -2.05
H3F3AP84243 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.27□□□□□ -2.05
H3F3AP84243 UBE2V1P9-201ENST00000414760 368 ntBASIC2.27□□□□□ -2.05
H3F3AP84243 AC080125.1-201ENST00000414888 684 ntBASIC2.27□□□□□ -2.05
H3F3AP84243 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.27□□□□□ -2.05
H3F3AP84243 RAD1P2-201ENST00000446414 663 ntBASIC2.27□□□□□ -2.05
H3F3AP84243 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.27□□□□□ -2.05
H3F3AP84243 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.27□□□□□ -2.05
H3F3AP84243 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.27□□□□□ -2.05
H3F3AP84243 AC090136.1-201ENST00000520009 240 ntBASIC2.27□□□□□ -2.05
H3F3AP84243 FAM60BP-201ENST00000578364 658 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms