Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN2P57739 RPL7P60-201ENST00000397636 735 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 HSPD1P16-201ENST00000402302 394 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 AL583834.1-201ENST00000406943 343 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 RNA5SP44-201ENST00000410446 133 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 Y_RNA.608-201ENST00000410647 95 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.77□□□□□ -1.81
CLDN2P57739 AC007899.1-201ENST00000412776 775 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 AC092447.6-201ENST00000414578 210 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 CDK8P2-201ENST00000415020 547 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN2P57739 AC068533.1-201ENST00000418542 415 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN2P57739 AC244098.2-201ENST00000422068 99 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN2P57739 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CLDN2P57739 AC112653.1-201ENST00000443851 386 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN2P57739 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.77□□□□□ -1.81
CLDN2P57739 AC098824.1-201ENST00000453565 980 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 Z82190.1-201ENST00000454534 490 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 CFTRP1-201ENST00000456646 183 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 UBDP1-202ENST00000457888 382 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN2P57739 SNORD42A-201ENST00000459584 64 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN2P57739 RPL7L1P8-201ENST00000469911 741 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 RPL7P24-201ENST00000493052 752 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN2P57739 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CLDN2P57739 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CLDN2P57739 AC104619.4-201ENST00000510773 249 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 AC079140.3-201ENST00000511111 550 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN2P57739 AP003497.1-201ENST00000528472 562 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.77□□□□□ -1.81
CLDN2P57739 CCNG2P1-201ENST00000549521 1000 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN2P57739 AC034268.2-201ENST00000571784 482 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN2P57739 AC233280.2-201ENST00000603917 1070 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 HMGN2P28-201ENST00000606102 262 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CLDN2P57739 AC100793.4-201ENST00000613683 429 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 AC104010.1-201ENST00000616889 150 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN2P57739 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN2P57739 AC106871.1-201ENST00000568324 3102 ntBASIC3.77□□□□□ -1.81
CLDN2P57739 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
CLDN2P57739 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN2P57739 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
CLDN2P57739 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN2P57739 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN2P57739 RNA5SP387-201ENST00000364226 106 ntBASIC3.76□□□□□ -1.81
CLDN2P57739 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CLDN2P57739 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CLDN2P57739 Y_RNA.559-201ENST00000384686 107 ntBASIC3.76□□□□□ -1.81
CLDN2P57739 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CLDN2P57739 AL663109.1-201ENST00000411498 844 ntBASIC3.76□□□□□ -1.81
CLDN2P57739 HMGN1P14-201ENST00000412459 517 ntBASIC3.76□□□□□ -1.81
CLDN2P57739 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN2P57739 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN2P57739 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN2P57739 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN2P57739 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN2P57739 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN2P57739 RPL22P17-201ENST00000438729 315 ntBASIC3.76□□□□□ -1.81
CLDN2P57739 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN2P57739 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN2P57739 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN2P57739 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN2P57739 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN2P57739 RPL7P49-201ENST00000471402 708 ntBASIC3.76□□□□□ -1.81
CLDN2P57739 RPL31P61-201ENST00000496160 376 ntBASIC3.76□□□□□ -1.81
CLDN2P57739 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN2P57739 AP002453.2-201ENST00000533503 320 ntBASIC3.76□□□□□ -1.81
CLDN2P57739 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN2P57739 CR383656.7-201ENST00000548164 174 ntBASIC3.76□□□□□ -1.81
CLDN2P57739 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN2P57739 AC009101.1-201ENST00000568135 242 ntBASIC3.76□□□□□ -1.81
CLDN2P57739 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN2P57739 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN2P57739 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN2P57739 BNIP3P8-201ENST00000597863 560 ntBASIC3.76□□□□□ -1.81
CLDN2P57739 AL031176.1-201ENST00000604554 466 ntBASIC3.76□□□□□ -1.81
CLDN2P57739 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.76□□□□□ -1.81
CLDN2P57739 AL603839.4-201ENST00000624658 1005 ntBASIC3.76□□□□□ -1.81
CLDN2P57739 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN2P57739 AC092104.1-201ENST00000497346 1441 ntBASIC3.76□□□□□ -1.81
CLDN2P57739 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN2P57739 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.76□□□□□ -1.81
CLDN2P57739 AC009902.3-201ENST00000606235 2172 ntBASIC3.76□□□□□ -1.81
CLDN2P57739 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CLDN2P57739 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CLDN2P57739 AC068254.2-201ENST00000623938 3577 ntBASIC3.76□□□□□ -1.81
CLDN2P57739 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN2P57739 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
CLDN2P57739 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CLDN2P57739 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN2P57739 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms