Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.73□□□□□ -1.97
CLDN18P56856 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
CLDN18P56856 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN18P56856 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLDN18P56856 RNU6-878P-201ENST00000384578 110 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 SNORA44-201ENST00000384584 132 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CLDN18P56856 SNORA26.7-201ENST00000391288 122 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 RNA5SP344-201ENST00000411081 104 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN18P56856 BOLA3P4-201ENST00000418151 400 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN18P56856 RPL27AP8-201ENST00000424277 446 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN18P56856 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN18P56856 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN18P56856 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN18P56856 AL590639.1-201ENST00000456484 337 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 AC078857.1-201ENST00000469870 667 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 RPL21P18-201ENST00000469899 480 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 AC080014.1-201ENST00000496877 1201 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 AC006445.2-201ENST00000510061 472 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 SNORA70.16-201ENST00000516390 95 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 RNU6-56P-201ENST00000516986 93 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 AC087272.1-201ENST00000523624 533 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.72□□□□□ -1.97
CLDN18P56856 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.72□□□□□ -1.97
CLDN18P56856 AP000867.2-201ENST00000532468 320 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 AC022080.3-201ENST00000544433 482 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN18P56856 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.72□□□□□ -1.97
CLDN18P56856 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.72□□□□□ -1.97
CLDN18P56856 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLDN18P56856 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN18P56856 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN18P56856 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.72□□□□□ -1.97
CLDN18P56856 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.72□□□□□ -1.97
CLDN18P56856 DUXAP4-201ENST00000603046 613 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 HSPE1P7-201ENST00000604681 321 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 AC093732.2-201ENST00000607950 274 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 AL356585.4-201ENST00000623078 1229 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN18P56856 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN18P56856 AC026634.1-201ENST00000634369 198 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLDN18P56856 AC092435.3-201ENST00000565538 3654 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 AC004972.1-201ENST00000623934 2209 ntBASIC2.72□□□□□ -1.97
CLDN18P56856 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLDN18P56856 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN18P56856 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN18P56856 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CLDN18P56856 RNU6-492P-201ENST00000363035 104 ntBASIC2.71□□□□□ -1.98
CLDN18P56856 U3.11-201ENST00000364476 212 ntBASIC2.71□□□□□ -1.98
CLDN18P56856 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN18P56856 MIR1289-1-201ENST00000408836 144 ntBASIC2.71□□□□□ -1.98
CLDN18P56856 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN18P56856 RPL7P10-201ENST00000417407 739 ntBASIC2.71□□□□□ -1.98
CLDN18P56856 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.71□□□□□ -1.98
CLDN18P56856 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN18P56856 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.71□□□□□ -1.98
CLDN18P56856 HMGB3P6-201ENST00000444896 598 ntBASIC2.71□□□□□ -1.98
CLDN18P56856 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN18P56856 Z82190.1-201ENST00000454534 490 ntBASIC2.71□□□□□ -1.98
CLDN18P56856 AC117440.1-201ENST00000474107 571 ntBASIC2.71□□□□□ -1.98
CLDN18P56856 RN7SL20P-201ENST00000488827 297 ntBASIC2.71□□□□□ -1.98
CLDN18P56856 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN18P56856 RAC1P5-201ENST00000512182 576 ntBASIC2.71□□□□□ -1.98
CLDN18P56856 GMPSP1-201ENST00000514075 579 ntBASIC2.71□□□□□ -1.98
CLDN18P56856 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.71□□□□□ -1.98
CLDN18P56856 SNORA48.10-201ENST00000516965 160 ntBASIC2.71□□□□□ -1.98
CLDN18P56856 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN18P56856 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
CLDN18P56856 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN18P56856 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN18P56856 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.71□□□□□ -1.98
CLDN18P56856 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN18P56856 MTCYBP27-201ENST00000555160 670 ntBASIC2.71□□□□□ -1.98
CLDN18P56856 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.71□□□□□ -1.98
CLDN18P56856 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN18P56856 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN18P56856 AC011260.1-201ENST00000578420 472 ntBASIC2.71□□□□□ -1.98
CLDN18P56856 AL451007.1-201ENST00000595491 289 ntBASIC2.71□□□□□ -1.98
CLDN18P56856 AC231759.1-201ENST00000616455 597 ntBASIC2.71□□□□□ -1.98
CLDN18P56856 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.71□□□□□ -1.98
CLDN18P56856 AC091564.4-201ENST00000533934 2194 ntBASIC2.71□□□□□ -1.98
CLDN18P56856 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.71□□□□□ -1.98
CLDN18P56856 AC000403.1-201ENST00000613696 3585 ntBASIC2.71□□□□□ -1.98
CLDN18P56856 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.7□□□□□ -1.98
CLDN18P56856 RNU6-1066P-201ENST00000363573 105 ntBASIC2.7□□□□□ -1.98
CLDN18P56856 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLDN18P56856 RNU6-882P-201ENST00000391025 103 ntBASIC2.7□□□□□ -1.98
CLDN18P56856 ARF4P3-201ENST00000397387 509 ntBASIC2.7□□□□□ -1.98
CLDN18P56856 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLDN18P56856 PTGES3P2-201ENST00000407942 482 ntBASIC2.7□□□□□ -1.98
CLDN18P56856 RNU2-47P-201ENST00000410649 186 ntBASIC2.7□□□□□ -1.98
CLDN18P56856 RNU6-575P-201ENST00000411326 105 ntBASIC2.7□□□□□ -1.98
CLDN18P56856 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN18P56856 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.7□□□□□ -1.98
CLDN18P56856 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.7□□□□□ -1.98
CLDN18P56856 AC092573.2-201ENST00000434546 243 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms