Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 ISCA1P1-201ENST00000426679 387 ntBASIC4.24□□□□□ -1.73
COPB1P53618 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.24□□□□□ -1.73
COPB1P53618 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.24□□□□□ -1.73
COPB1P53618 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.24□□□□□ -1.73
COPB1P53618 MTND6P13-201ENST00000443510 523 ntBASIC4.24□□□□□ -1.73
COPB1P53618 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.24□□□□□ -1.73
COPB1P53618 AC002381.1-201ENST00000447049 280 ntBASIC4.24□□□□□ -1.73
COPB1P53618 AP000542.1-201ENST00000448473 371 ntBASIC4.24□□□□□ -1.73
COPB1P53618 Z82190.1-201ENST00000454534 490 ntBASIC4.24□□□□□ -1.73
COPB1P53618 AC084198.1-201ENST00000477747 402 ntBASIC4.24□□□□□ -1.73
COPB1P53618 FAM172BP-201ENST00000487497 1089 ntBASIC4.24□□□□□ -1.73
COPB1P53618 RPL21P129-201ENST00000491732 478 ntBASIC4.24□□□□□ -1.73
COPB1P53618 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
COPB1P53618 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.24□□□□□ -1.73
COPB1P53618 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.24□□□□□ -1.73
COPB1P53618 RNU6-430P-201ENST00000517078 107 ntBASIC4.24□□□□□ -1.73
COPB1P53618 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.24□□□□□ -1.73
COPB1P53618 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.24□□□□□ -1.73
COPB1P53618 DEFB108A-201ENST00000530110 222 ntBASIC4.24□□□□□ -1.73
COPB1P53618 AP003122.4-201ENST00000530980 758 ntBASIC4.24□□□□□ -1.73
COPB1P53618 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.24□□□□□ -1.73
COPB1P53618 AC124947.2-202ENST00000552735 133 ntBASIC4.24□□□□□ -1.73
COPB1P53618 AL133241.1-201ENST00000556832 487 ntBASIC4.24□□□□□ -1.73
COPB1P53618 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.24□□□□□ -1.73
COPB1P53618 BNIP3P22-201ENST00000593399 556 ntBASIC4.24□□□□□ -1.73
COPB1P53618 AC067959.1-201ENST00000604334 379 ntBASIC4.24□□□□□ -1.73
COPB1P53618 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.24□□□□□ -1.73
COPB1P53618 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.24□□□□□ -1.73
COPB1P53618 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COPB1P53618 AC011978.2-201ENST00000569835 2054 ntBASIC4.24□□□□□ -1.73
COPB1P53618 CCT4P2-201ENST00000233836 1548 ntBASIC4.24□□□□□ -1.73
COPB1P53618 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COPB1P53618 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.24□□□□□ -1.73
COPB1P53618 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COPB1P53618 ELL2P4-201ENST00000446870 1376 ntBASIC4.24□□□□□ -1.73
COPB1P53618 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COPB1P53618 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COPB1P53618 AC006504.1-201ENST00000562493 3666 ntBASIC4.24□□□□□ -1.73
COPB1P53618 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COPB1P53618 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
COPB1P53618 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
COPB1P53618 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COPB1P53618 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COPB1P53618 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.23□□□□□ -1.73
COPB1P53618 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
COPB1P53618 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COPB1P53618 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
COPB1P53618 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
COPB1P53618 RNA5SP515-201ENST00000364570 118 ntBASIC4.23□□□□□ -1.73
COPB1P53618 Y_RNA.554-201ENST00000384672 102 ntBASIC4.23□□□□□ -1.73
COPB1P53618 RPL17P50-201ENST00000396131 546 ntBASIC4.23□□□□□ -1.73
COPB1P53618 AL031679.1-201ENST00000400616 525 ntBASIC4.23□□□□□ -1.73
COPB1P53618 AC069218.2-201ENST00000411665 344 ntBASIC4.23□□□□□ -1.73
COPB1P53618 AC122718.1-201ENST00000439448 744 ntBASIC4.23□□□□□ -1.73
COPB1P53618 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.23□□□□□ -1.73
COPB1P53618 GAPDHP17-201ENST00000449858 1001 ntBASIC4.23□□□□□ -1.73
COPB1P53618 FAM133DP-201ENST00000464802 691 ntBASIC4.23□□□□□ -1.73
COPB1P53618 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COPB1P53618 AC112204.1-201ENST00000502591 103 ntBASIC4.23□□□□□ -1.73
COPB1P53618 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.23□□□□□ -1.73
COPB1P53618 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.23□□□□□ -1.73
COPB1P53618 SNORA18.6-201ENST00000516792 115 ntBASIC4.23□□□□□ -1.73
COPB1P53618 MTCO2P4-201ENST00000517968 247 ntBASIC4.23□□□□□ -1.73
COPB1P53618 AP003467.2-201ENST00000520175 319 ntBASIC4.23□□□□□ -1.73
COPB1P53618 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.23□□□□□ -1.73
COPB1P53618 SUMO2P20-201ENST00000520803 283 ntBASIC4.23□□□□□ -1.73
COPB1P53618 AC022861.1-201ENST00000522981 663 ntBASIC4.23□□□□□ -1.73
COPB1P53618 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.23□□□□□ -1.73
COPB1P53618 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.23□□□□□ -1.73
COPB1P53618 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.23□□□□□ -1.73
COPB1P53618 RPL21P5-201ENST00000554662 472 ntBASIC4.23□□□□□ -1.73
COPB1P53618 AC234778.2-201ENST00000566241 354 ntBASIC4.23□□□□□ -1.73
COPB1P53618 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.23□□□□□ -1.73
COPB1P53618 AC099489.2-201ENST00000574976 260 ntBASIC4.23□□□□□ -1.73
COPB1P53618 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.23□□□□□ -1.73
COPB1P53618 AC103710.1-201ENST00000610003 901 ntBASIC4.23□□□□□ -1.73
COPB1P53618 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.23□□□□□ -1.73
COPB1P53618 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COPB1P53618 AC138649.3-201ENST00000622154 254 ntBASIC4.23□□□□□ -1.73
COPB1P53618 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
COPB1P53618 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COPB1P53618 AC007529.1-201ENST00000418574 2178 ntBASIC4.23□□□□□ -1.73
COPB1P53618 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.23□□□□□ -1.73
COPB1P53618 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COPB1P53618 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.23□□□□□ -1.73
COPB1P53618 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COPB1P53618 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
COPB1P53618 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
COPB1P53618 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.22□□□□□ -1.73
COPB1P53618 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COPB1P53618 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COPB1P53618 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
COPB1P53618 MIR199A2-201ENST00000385289 110 ntBASIC4.22□□□□□ -1.73
COPB1P53618 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
COPB1P53618 RNU4-6P-201ENST00000410804 122 ntBASIC4.22□□□□□ -1.73
COPB1P53618 MTCO1P17-201ENST00000411522 491 ntBASIC4.22□□□□□ -1.73
COPB1P53618 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.22□□□□□ -1.73
COPB1P53618 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COPB1P53618 C1DP2-201ENST00000418167 426 ntBASIC4.22□□□□□ -1.73
COPB1P53618 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms