Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXC8P31273 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC8P31273 RPL39P6-201ENST00000448289 150 ntBASIC3.81□□□□□ -1.8
HOXC8P31273 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXC8P31273 snoU109.4-201ENST00000458953 143 ntBASIC3.81□□□□□ -1.8
HOXC8P31273 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC8P31273 RPL7P18-201ENST00000478965 734 ntBASIC3.81□□□□□ -1.8
HOXC8P31273 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXC8P31273 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC8P31273 AC010587.2-201ENST00000511727 448 ntBASIC3.81□□□□□ -1.8
HOXC8P31273 AC010342.1-201ENST00000514047 877 ntBASIC3.81□□□□□ -1.8
HOXC8P31273 RN7SKP244-201ENST00000516513 307 ntBASIC3.81□□□□□ -1.8
HOXC8P31273 RNU6-232P-201ENST00000517144 64 ntBASIC3.81□□□□□ -1.8
HOXC8P31273 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC8P31273 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC8P31273 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC8P31273 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXC8P31273 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXC8P31273 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC8P31273 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.81□□□□□ -1.8
HOXC8P31273 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.81□□□□□ -1.8
HOXC8P31273 EEF1B2P4-201ENST00000551398 348 ntBASIC3.81□□□□□ -1.8
HOXC8P31273 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC8P31273 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC8P31273 AC135628.1-201ENST00000568867 534 ntBASIC3.81□□□□□ -1.8
HOXC8P31273 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXC8P31273 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXC8P31273 MIR5004-201ENST00000579078 107 ntBASIC3.81□□□□□ -1.8
HOXC8P31273 AP005136.1-201ENST00000579765 429 ntBASIC3.81□□□□□ -1.8
HOXC8P31273 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.81□□□□□ -1.8
HOXC8P31273 AC008638.3-201ENST00000603341 463 ntBASIC3.81□□□□□ -1.8
HOXC8P31273 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC8P31273 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXC8P31273 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXC8P31273 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXC8P31273 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC8P31273 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC8P31273 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC8P31273 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXC8P31273 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC8P31273 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 RNU6-50P-201ENST00000362356 103 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 Y_RNA.318-201ENST00000365131 97 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC8P31273 SNORA48.2-201ENST00000390926 124 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 HSPE1P8-201ENST00000406997 288 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 AC096664.2-201ENST00000411843 406 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXC8P31273 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC8P31273 TOMM22P1-201ENST00000418578 312 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC8P31273 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXC8P31273 THAP5P1-201ENST00000439089 262 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXC8P31273 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.8□□□□□ -1.8
HOXC8P31273 RPS29P31-201ENST00000446147 164 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 RPL12P26-201ENST00000452430 487 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 RPS24P6-201ENST00000452670 400 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 HMGB1P15-201ENST00000453854 435 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXC8P31273 BZW1P2-201ENST00000473537 826 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 MTND3P7-201ENST00000474435 343 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXC8P31273 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXC8P31273 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXC8P31273 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXC8P31273 AC111000.2-201ENST00000507775 550 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 HMGB1P28-201ENST00000507778 552 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 FCF1P8-201ENST00000510322 597 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 AC079395.1-201ENST00000510981 262 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 NDUFB4P9-201ENST00000511646 388 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 AC109445.1-201ENST00000512356 383 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXC8P31273 RNU6-27P-201ENST00000516146 107 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 SLC2A13P1-201ENST00000531560 322 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXC8P31273 RPL21P12-201ENST00000559810 515 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 AL133457.1-201ENST00000564251 987 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXC8P31273 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXC8P31273 AC002400.1-201ENST00000569310 726 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 MIR3690-201ENST00000580266 75 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 CKS1BP3-201ENST00000600888 237 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 VN1R82P-201ENST00000601481 356 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 AC010738.1-201ENST00000604970 987 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 OR2AS2P-201ENST00000606902 342 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 AC080013.4-201ENST00000607624 649 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 AC072039.2-201ENST00000608883 439 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXC8P31273 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXC8P31273 AC079248.2-201ENST00000623779 326 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 AC091925.2-201ENST00000625059 256 ntBASIC3.8□□□□□ -1.8
HOXC8P31273 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC8P31273 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC8P31273 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC8P31273 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXC8P31273 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXC8P31273 AL031985.3-201ENST00000565390 2449 ntBASIC3.79□□□□□ -1.8
HOXC8P31273 SNRPEP3-201ENST00000338402 276 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms